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  5. Pp1s103_35V6

Pp1s103_35V6


Description : MZB10.7; pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana]


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s103_35V6
Cluster HCCA clusters: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
At2g20540 No alias Pentatricopeptide repeat-containing protein At2g20540... 0.04 Orthogroups_2024-Update
Brara.F00971.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H03084.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G073017 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 Orthogroups_2024-Update
GRMZM2G168378 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Orthogroups_2024-Update
GRMZM2G440349 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 Orthogroups_2024-Update
GRMZM5G862936 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Orthogroups_2024-Update
Glyma.07G068600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Orthogroups_2024-Update
Glyma.18G134700 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G287500 No alias mitochondrial editing factor 22 0.02 Orthogroups_2024-Update
HORVU2Hr1G053030.5 No alias Unknown function 0.01 Orthogroups_2024-Update
HORVU3Hr1G058070.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G067720.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G115460.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G051030.9 No alias RNA editing factor *(REME1) 0.03 Orthogroups_2024-Update
MA_465411g0010 No alias (at4g18750 : 483.0) Encodes a pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
MA_472579g0010 No alias (at4g33170 : 615.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
MA_501007g0010 No alias (at4g13650 : 662.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
Potri.012G108000 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.01 Orthogroups_2024-Update
Potri.013G152000 No alias mitochondrial editing factor 22 0.01 Orthogroups_2024-Update
Potri.016G128900 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 Orthogroups_2024-Update
Seita.2G068700.1 No alias RNA editing factor *(CRR28) 0.01 Orthogroups_2024-Update
Sobic.001G069300.2 No alias RNA editing factor *(DEK36) 0.01 Orthogroups_2024-Update
Sobic.001G151300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G347100.2 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.002G034400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G084400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G172500.3 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G358900.3 No alias RNA editing factor *(OTP90) 0.01 Orthogroups_2024-Update
Sobic.002G385200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.003G047400.1 No alias RNA editing factor *(OTP81) 0.01 Orthogroups_2024-Update
Sobic.003G142400.2 No alias RNA editing factor *(PGN) 0.03 Orthogroups_2024-Update
Sobic.003G182501.1 No alias Unknown function 0.11 Orthogroups_2024-Update
Sobic.003G333200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G051600.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.004G053100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G217900.2 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.004G290400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G312000.1 No alias RNA editing factor *(CLB19) 0.02 Orthogroups_2024-Update
Sobic.006G069100.3 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G146400.4 No alias RNA editing factor *(MEF12) 0.01 Orthogroups_2024-Update
Sobic.007G187600.1 No alias processivity component *(REV7) of DNA polymerase zeta complex 0.02 Orthogroups_2024-Update
Sobic.007G208400.1 No alias RNA editing factor *(REME1) 0.01 Orthogroups_2024-Update
Sobic.008G009000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G066900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G116400.4 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G136200.1 No alias RNA editing factor *(MEF32) 0.01 Orthogroups_2024-Update
Sobic.009G155400.3 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.009G241200.3 No alias RNA editing factor *(ECB2/VAC1) 0.01 Orthogroups_2024-Update
Sobic.010G181000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G232700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g049810 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Sopen01g039430 No alias PPR repeat family 0.01 Orthogroups_2024-Update
evm.model.contig_4456.11 No alias (at5g61990 : 169.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 346 387
IPR002885 Pentatricopeptide_repeat 214 268
IPR002885 Pentatricopeptide_repeat 389 435
IPR002885 Pentatricopeptide_repeat 588 635
IPR002885 Pentatricopeptide_repeat 288 334
IPR002885 Pentatricopeptide_repeat 486 534
IPR002885 Pentatricopeptide_repeat 562 587
No external refs found!