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  5. Solyc11g006780

Solyc11g006780


Description : Vesicle-associated membrane protein, putative (AHRD V3.3 *** B9RPU0_RICCO)


Gene families : OG_42_0000264 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g006780
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Bradi1g05030 No alias vesicle-associated membrane protein 726 0.02 Orthogroups_2024-Update
Brara.D02004.1 No alias R-type VAMP7-group component of SNARE longin membrane... 0.03 Orthogroups_2024-Update
Cre04.g225900 No alias vesicle-associated membrane protein 727 0.03 Orthogroups_2024-Update
LOC_Os02g55990 No alias vesicle-associated membrane protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_94963g0010 No alias (at2g32670 : 349.0) member of Synaptobrevin -like... 0.02 Orthogroups_2024-Update
Mp7g07410.1 No alias VAMP7-type R-type SNARE longin protein 0.02 Orthogroups_2024-Update
Seita.2G097000.1 No alias R-type component *(VAMP721/VAMP722) of SNARE cell-plate... 0.03 Orthogroups_2024-Update
Seita.6G243100.1 No alias R-type VAMP7-group component of SNARE longin membrane... 0.03 Orthogroups_2024-Update
Seita.9G049300.1 No alias R-type component *(VAMP721/VAMP722) of SNARE cell-plate... 0.03 Orthogroups_2024-Update
Sopen02g018280 No alias Synaptobrevin 0.03 Orthogroups_2024-Update
evm.model.tig00000880.46 No alias (at5g22360 : 152.0) Member of Synaptobrevin-like... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001388 Synaptobrevin 150 236
IPR010908 Longin_dom 32 97
No external refs found!