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  5. Pp1s105_212V6

Pp1s105_212V6


Description : ap2 erf domain-containing transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s105_212V6
Cluster HCCA clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
A4A49_08495 No alias ethylene-responsive transcription factor 3 0.02 Orthogroups_2024-Update
At1g77640 No alias Ethylene-responsive transcription factor ERF013... 0.03 Orthogroups_2024-Update
Bradi1g23756 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Bradi1g72449 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g08380 No alias related to AP2 6l 0.04 Orthogroups_2024-Update
Brara.K01077.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G020016 No alias ERF domain protein 12 0.02 Orthogroups_2024-Update
GRMZM2G057386 No alias ethylene responsive element binding factor 5 0.05 Orthogroups_2024-Update
Glyma.03G112700 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.04G084000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.14G123900 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
Glyma.18G091600 No alias ethylene responsive element binding factor 3 0.02 Orthogroups_2024-Update
HORVU1Hr1G067160.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g43940 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_134453g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_69434g0020 No alias (q40479|erf2_tobac : 84.0) Ethylene-responsive... 0.02 Orthogroups_2024-Update
PSME_00005184-RA No alias (q40479|erf2_tobac : 141.0) Ethylene-responsive... 0.04 Orthogroups_2024-Update
PSME_00042940-RA No alias (at1g53910 : 121.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
Potri.010G006800 No alias ethylene-responsive element binding protein 0.02 Orthogroups_2024-Update
Potri.010G072600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.017G055400 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.019G131300 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Seita.2G156200.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Seita.5G141600.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Seita.9G516600.1 No alias subgroup ERF-VII transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G350500.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.03 Orthogroups_2024-Update
Sobic.004G100700.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G227400.2 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G295700.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G321300.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Sobic.007G124100.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G145000.2 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.02 Orthogroups_2024-Update
Solyc02g090770 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Solyc08g007230 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc10g076370 No alias Dehydration-responsive element binding protein (AHRD... 0.02 Orthogroups_2024-Update
Sopen02g035400 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen02g037700 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen08g026670 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 20 69
No external refs found!