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  5. Pp1s10_176V6

Pp1s10_176V6


Description : vesicle-associated membrane


Gene families : OG_42_0000404 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s10_176V6
Cluster HCCA clusters: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
Bradi3g16630 No alias vesicle associated protein 0.03 Orthogroups_2024-Update
Brara.G01895.1 No alias contact site protein (VAP27) of... 0.02 Orthogroups_2024-Update
HORVU3Hr1G099730.1 No alias contact site protein (VAP27) of... 0.01 Orthogroups_2024-Update
LOC_Os10g36350 No alias MSP domain containing protein, putative, expressed 0.01 Orthogroups_2024-Update
Potri.002G144800 No alias Plant VAMP (vesicle-associated membrane protein) family protein 0.02 Orthogroups_2024-Update
Solyc08g007200 No alias Vesicle-associated protein 2-1 (AHRD V3.3 *** W9S0E2_9ROSA) 0.02 Orthogroups_2024-Update
Sopen01g036720 No alias MSP (Major sperm protein) domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Predicted GO
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
InterPro domains Description Start Stop
IPR000535 MSP_dom 6 105
No external refs found!