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  5. Pp1s113_212V6

Pp1s113_212V6


Description : root phototropism


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s113_212V6
Cluster HCCA clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
74933 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
A4A49_05254 No alias btbpoz domain-containing protein npy1 0.02 Orthogroups_2024-Update
A4A49_18800 No alias btbpoz domain-containing protein 0.02 Orthogroups_2024-Update
A4A49_32094 No alias btbpoz domain-containing protein 0.02 Orthogroups_2024-Update
At2g30520 No alias Root phototropism protein 2... 0.02 Orthogroups_2024-Update
Bradi1g70761 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Brara.F03270.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.03G080600 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.05G104000 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.08G069800 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.10G053700 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.11G200201 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.13G368300 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G032660.3 No alias Unknown function 0.05 Orthogroups_2024-Update
LOC_Os03g52880 No alias BTBN9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain... 0.03 Orthogroups_2024-Update
LOC_Os07g44570 No alias root phototropism protein 3, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00021708-RA No alias (at5g66560 : 98.6) Phototropic-responsive NPH3 family... 0.02 Orthogroups_2024-Update
Potri.005G130700 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Potri.005G146400 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Potri.007G033900 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Potri.010G046800 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Potri.014G133500 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Pp1s190_58V6 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 277 587
No external refs found!