Description : rubisco subunit binding-protein alpha subunit
Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Physcomitrella release: Pp1s114_95V6 | |
Cluster | HCCA clusters: Cluster_272 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AC215201.3_FG005 | No alias | chaperonin-60alpha | 0.02 | Orthogroups_2024-Update | |
At1g26230 | No alias | Cpn60beta4 [Source:UniProtKB/TrEMBL;Acc:A0A178WH16] | 0.02 | Orthogroups_2024-Update | |
At2g33210 | No alias | Chaperonin CPN60-like 1, mitochondrial... | 0.02 | Orthogroups_2024-Update | |
At3g13860 | No alias | Chaperonin CPN60-like 2, mitochondrial... | 0.03 | Orthogroups_2024-Update | |
Bradi1g50270 | No alias | chaperonin 60 beta | 0.05 | Orthogroups_2024-Update | |
Bradi4g38090 | No alias | TCP-1/cpn60 chaperonin family protein | 0.02 | Orthogroups_2024-Update | |
Bradi5g02890 | No alias | chaperonin-60alpha | 0.02 | Orthogroups_2024-Update | |
Brara.B00789.1 | No alias | subunit alpha of Cpn60 chaperonin complex & subunit... | 0.02 | Orthogroups_2024-Update | |
Brara.C03936.1 | No alias | chaperone *(Hsp60) | 0.03 | Orthogroups_2024-Update | |
Brara.H00053.1 | No alias | chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin... | 0.04 | Orthogroups_2024-Update | |
Glyma.02G126300 | No alias | TCP-1/cpn60 chaperonin family protein | 0.02 | Orthogroups_2024-Update | |
Glyma.07G009600 | No alias | heat shock protein 60-3A | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G038680.8 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
HORVU2Hr1G007840.7 | No alias | subunit alpha of Cpn60 chaperonin complex & subunit... | 0.03 | Orthogroups_2024-Update | |
MA_97627g0010 | No alias | (p08927|rubb_pea : 646.0) RuBisCO large subunit-binding... | 0.03 | Orthogroups_2024-Update | |
Potri.001G002500 | No alias | TCP-1/cpn60 chaperonin family protein | 0.04 | Orthogroups_2024-Update | |
Potri.003G222400 | No alias | TCP-1/cpn60 chaperonin family protein | 0.02 | Orthogroups_2024-Update | |
Potri.010G135100 | No alias | TCP-1/cpn60 chaperonin family protein | 0.02 | Orthogroups_2024-Update | |
Pp1s14_298V6 | No alias | ru large subunit-binding protein subunit beta | 0.02 | Orthogroups_2024-Update | |
Seita.3G283900.1 | No alias | subunit alpha of Cpn60 chaperonin complex & subunit... | 0.03 | Orthogroups_2024-Update | |
Seita.4G010900.1 | No alias | chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin... | 0.05 | Orthogroups_2024-Update | |
Seita.7G110500.1 | No alias | subunit beta of Cpn60 chaperonin complex & subunit beta... | 0.03 | Orthogroups_2024-Update | |
Sobic.009G098100.1 | No alias | subunit alpha of Cpn60 chaperonin complex & subunit... | 0.03 | Orthogroups_2024-Update | |
Solyc03g120850 | No alias | Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU) | 0.03 | Orthogroups_2024-Update | |
Sopen01g016850 | No alias | TCP-1/cpn60 chaperonin family | 0.02 | Orthogroups_2024-Update | |
Sopen03g040450 | No alias | TCP-1/cpn60 chaperonin family | 0.02 | Orthogroups_2024-Update | |
evm.model.tig00001269.7 | No alias | (q05046|ch62_cucma : 728.0) Chaperonin CPN60-2,... | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0005048 | signal sequence binding | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
BP | GO:0006621 | protein retention in ER lumen | IEP | Predicted GO |
MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
CC | GO:0030117 | membrane coat | IEP | Predicted GO |
CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | Predicted GO |
CC | GO:0030131 | clathrin adaptor complex | IEP | Predicted GO |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Predicted GO |
BP | GO:0032507 | maintenance of protein location in cell | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
MF | GO:0033218 | amide binding | IEP | Predicted GO |
BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Predicted GO |
MF | GO:0042277 | peptide binding | IEP | Predicted GO |
BP | GO:0045185 | maintenance of protein location | IEP | Predicted GO |
MF | GO:0046923 | ER retention sequence binding | IEP | Predicted GO |
MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
MF | GO:0050661 | NADP binding | IEP | Predicted GO |
MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
BP | GO:0051235 | maintenance of location | IEP | Predicted GO |
MF | GO:0051287 | NAD binding | IEP | Predicted GO |
BP | GO:0051651 | maintenance of location in cell | IEP | Predicted GO |
BP | GO:0065008 | regulation of biological quality | IEP | Predicted GO |
MF | GO:0070279 | vitamin B6 binding | IEP | Predicted GO |
BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002423 | Cpn60/TCP-1 | 87 | 589 |
No external refs found! |