Coexpression cluster: Cluster_272 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0008144 drug binding 21.05% (12/57) 2.31 4e-06 0.00079
GO:0003674 molecular_function 52.63% (30/57) 0.87 0.000135 0.003977
GO:0030554 adenyl nucleotide binding 17.54% (10/57) 2.05 0.000124 0.004259
GO:0006270 DNA replication initiation 3.51% (2/57) 6.69 0.000167 0.004297
GO:0036094 small molecule binding 21.05% (12/57) 1.86 8.8e-05 0.004516
GO:0032559 adenyl ribonucleotide binding 17.54% (10/57) 2.06 0.000121 0.004989
GO:0005524 ATP binding 17.54% (10/57) 2.13 7.8e-05 0.005379
GO:1901363 heterocyclic compound binding 26.32% (15/57) 1.41 0.000319 0.005482
GO:0097159 organic cyclic compound binding 26.32% (15/57) 1.41 0.000319 0.005482
GO:0043168 anion binding 21.05% (12/57) 1.91 6.1e-05 0.006274
GO:0048523 negative regulation of cellular process 3.51% (2/57) 6.24 0.000317 0.006532
GO:0005488 binding 35.09% (20/57) 1.08 0.000554 0.006715
GO:0032553 ribonucleotide binding 17.54% (10/57) 1.81 0.000492 0.006761
GO:0017076 purine nucleotide binding 17.54% (10/57) 1.82 0.00046 0.006767
GO:0097367 carbohydrate derivative binding 17.54% (10/57) 1.79 0.000532 0.006844
GO:0032555 purine ribonucleotide binding 17.54% (10/57) 1.82 0.000447 0.007076
GO:0035639 purine ribonucleoside triphosphate binding 17.54% (10/57) 1.89 0.000314 0.007176
GO:1901265 nucleoside phosphate binding 17.54% (10/57) 1.66 0.001076 0.011086
GO:0000166 nucleotide binding 17.54% (10/57) 1.66 0.001076 0.011086
GO:0048519 negative regulation of biological process 3.51% (2/57) 5.39 0.001046 0.011967
GO:0006259 DNA metabolic process 5.26% (3/57) 3.64 0.001814 0.012884
GO:1905462 regulation of DNA duplex unwinding 1.75% (1/57) 9.15 0.001766 0.012995
GO:0042555 MCM complex 1.75% (1/57) 9.15 0.001766 0.012995
GO:1905775 negative regulation of DNA helicase activity 1.75% (1/57) 9.15 0.001766 0.012995
GO:0051095 regulation of helicase activity 1.75% (1/57) 9.15 0.001766 0.012995
GO:0051097 negative regulation of helicase activity 1.75% (1/57) 9.15 0.001766 0.012995
GO:1905774 regulation of DNA helicase activity 1.75% (1/57) 9.15 0.001766 0.012995
GO:1905463 negative regulation of DNA duplex unwinding 1.75% (1/57) 9.15 0.001766 0.012995
GO:0006807 nitrogen compound metabolic process 21.05% (12/57) 1.36 0.00196 0.013456
GO:0043170 macromolecule metabolic process 19.3% (11/57) 1.43 0.002149 0.014278
GO:0090304 nucleic acid metabolic process 8.77% (5/57) 2.43 0.002334 0.015024
GO:0043167 ion binding 21.05% (12/57) 1.39 0.001678 0.01646
GO:0006725 cellular aromatic compound metabolic process 10.53% (6/57) 2.08 0.002875 0.017948
GO:0044238 primary metabolic process 22.81% (13/57) 1.21 0.003141 0.019031
GO:1901360 organic cyclic compound metabolic process 10.53% (6/57) 2.05 0.003245 0.0191
GO:2001251 negative regulation of chromosome organization 1.75% (1/57) 8.15 0.003529 0.020196
GO:0003824 catalytic activity 29.82% (17/57) 0.95 0.004326 0.024087
GO:0044092 negative regulation of molecular function 1.75% (1/57) 7.56 0.00529 0.024765
GO:0051346 negative regulation of hydrolase activity 1.75% (1/57) 7.56 0.00529 0.024765
GO:0043086 negative regulation of catalytic activity 1.75% (1/57) 7.56 0.00529 0.024765
GO:0071704 organic substance metabolic process 22.81% (13/57) 1.14 0.004707 0.025519
GO:0030170 pyridoxal phosphate binding 3.51% (2/57) 4.24 0.00508 0.026162
GO:0070279 vitamin B6 binding 3.51% (2/57) 4.24 0.00508 0.026162
GO:0016740 transferase activity 15.79% (9/57) 1.45 0.005208 0.026167
GO:0004665 prephenate dehydrogenase (NADP+) activity 1.75% (1/57) 6.82 0.008801 0.026661
GO:0006571 tyrosine biosynthetic process 1.75% (1/57) 6.82 0.008801 0.026661
GO:0008977 prephenate dehydrogenase (NAD+) activity 1.75% (1/57) 6.82 0.008801 0.026661
GO:0010639 negative regulation of organelle organization 1.75% (1/57) 6.82 0.008801 0.026661
GO:0051172 negative regulation of nitrogen compound metabolic process 1.75% (1/57) 6.82 0.008801 0.026661
GO:0051129 negative regulation of cellular component organization 1.75% (1/57) 6.82 0.008801 0.026661
GO:0051336 regulation of hydrolase activity 1.75% (1/57) 6.82 0.008801 0.026661
GO:0031324 negative regulation of cellular metabolic process 1.75% (1/57) 6.82 0.008801 0.026661
GO:0033044 regulation of chromosome organization 1.75% (1/57) 6.82 0.008801 0.026661
GO:0008152 metabolic process 26.32% (15/57) 0.97 0.007128 0.027193
GO:1902679 negative regulation of RNA biosynthetic process 1.75% (1/57) 7.15 0.007047 0.027389
GO:0009890 negative regulation of biosynthetic process 1.75% (1/57) 7.15 0.007047 0.027389
GO:0051253 negative regulation of RNA metabolic process 1.75% (1/57) 7.15 0.007047 0.027389
GO:0031327 negative regulation of cellular biosynthetic process 1.75% (1/57) 7.15 0.007047 0.027389
GO:1903507 negative regulation of nucleic acid-templated transcription 1.75% (1/57) 7.15 0.007047 0.027389
GO:2000113 negative regulation of cellular macromolecule biosynthetic process 1.75% (1/57) 7.15 0.007047 0.027389
GO:0045892 negative regulation of transcription, DNA-templated 1.75% (1/57) 7.15 0.007047 0.027389
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 1.75% (1/57) 7.15 0.007047 0.027389
GO:0010558 negative regulation of macromolecule biosynthetic process 1.75% (1/57) 7.15 0.007047 0.027389
GO:0019842 vitamin binding 3.51% (2/57) 3.94 0.00763 0.02858
GO:0009987 cellular process 22.81% (13/57) 1.05 0.007786 0.028643
GO:0003676 nucleic acid binding 12.28% (7/57) 1.58 0.008437 0.029968
GO:0006139 nucleobase-containing compound metabolic process 8.77% (5/57) 1.99 0.008343 0.030153
GO:0005634 nucleus 5.26% (3/57) 2.84 0.008646 0.030188
GO:0006570 tyrosine metabolic process 1.75% (1/57) 6.56 0.010552 0.030614
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor 1.75% (1/57) 6.56 0.010552 0.030614
GO:0006468 protein phosphorylation 8.77% (5/57) 1.91 0.010466 0.031248
GO:0008150 biological_process 33.33% (19/57) 0.75 0.011238 0.032154
GO:0044237 cellular metabolic process 19.3% (11/57) 1.1 0.011632 0.032824
GO:0046483 heterocycle metabolic process 8.77% (5/57) 1.84 0.012806 0.03565
GO:0043227 membrane-bounded organelle 5.26% (3/57) 2.56 0.014568 0.038475
GO:0043231 intracellular membrane-bounded organelle 5.26% (3/57) 2.56 0.014568 0.038475
GO:0003697 single-stranded DNA binding 1.75% (1/57) 6.15 0.014044 0.038575
GO:0016772 transferase activity, transferring phosphorus-containing groups 10.53% (6/57) 1.59 0.014507 0.039322
GO:0016310 phosphorylation 8.77% (5/57) 1.76 0.015848 0.039812
GO:0070569 uridylyltransferase activity 1.75% (1/57) 5.98 0.015786 0.040148
GO:0044260 cellular macromolecule metabolic process 14.04% (8/57) 1.29 0.015741 0.040532
GO:0004672 protein kinase activity 8.77% (5/57) 1.77 0.015553 0.040556
GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway 1.75% (1/57) 5.82 0.017525 0.043496
GO:0016769 transferase activity, transferring nitrogenous groups 1.75% (1/57) 5.69 0.019261 0.046679
GO:0008483 transaminase activity 1.75% (1/57) 5.69 0.019261 0.046679
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_251 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_11 0.025 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_44 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_174 0.028 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_72 0.026 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_107 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_135 0.03 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_124 0.028 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_94 0.021 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_58 0.023 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_149 0.028 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_175 0.024 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_218 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_239 0.025 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_449 0.033 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_71 0.035 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_231 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_109 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_206 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_251 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_252 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_342 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_374 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_475 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_483 0.028 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_487 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_507 0.027 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_521 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_14 0.022 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_160 0.03 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_56 0.019 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0157 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_66 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_75 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_254 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_4 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_89 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_97 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_161 0.025 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_76 0.02 Orthogroups_2024-Update Compare
Sequences (57) (download table)

InterPro Domains

GO Terms

Family Terms