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  5. Pp1s116_110V6

Pp1s116_110V6


Description : ultraviolet-b-repressible protein


Gene families : OG_42_0003584 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s116_110V6
Cluster HCCA clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
A4A49_00335 No alias hypothetical protein 0.17 Orthogroups_2024-Update
A4A49_04481 No alias hypothetical protein 0.16 Orthogroups_2024-Update
A4A49_65027 No alias hypothetical protein 0.06 Orthogroups_2024-Update
At2g06520 No alias PSBX [Source:UniProtKB/TrEMBL;Acc:A0A178W0Y5] 0.03 Orthogroups_2024-Update
Bradi1g18050 No alias photosystem II subunit X 0.03 Orthogroups_2024-Update
Brara.G00467.1 No alias component *(PsbX) of PS-II complex 0.19 Orthogroups_2024-Update
Brara.H00651.1 No alias component *(PsbX) of PS-II complex 0.07 Orthogroups_2024-Update
Brara.H00652.1 No alias component *(PsbX) of PS-II complex 0.07 Orthogroups_2024-Update
Glyma.04G055300 No alias photosystem II subunit X 0.09 Orthogroups_2024-Update
Glyma.06G055500 No alias photosystem II subunit X 0.27 Orthogroups_2024-Update
Glyma.09G067700 No alias photosystem II subunit X 0.07 Orthogroups_2024-Update
Glyma.09G073900 No alias photosystem II subunit X 0.11 Orthogroups_2024-Update
Glyma.15G174200 No alias photosystem II subunit X 0.05 Orthogroups_2024-Update
HORVU2Hr1G019270.2 No alias component *(PsbX) of PS-II complex 0.04 Orthogroups_2024-Update
Kfl00682_0050 kfl00682_0050_v1.1 no hits & (original description: no original description) 0.1 Orthogroups_2024-Update
LOC_Os03g22370 No alias ultraviolet-B-repressible protein, putative, expressed 0.06 Orthogroups_2024-Update
MA_59693g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
Mp6g21460.1 No alias component PsbX of PS-II complex 0.03 Orthogroups_2024-Update
Potri.018G065200 No alias photosystem II subunit X 0.04 Orthogroups_2024-Update
Pp1s249_53V6 No alias ultraviolet-b-repressible protein 0.1 Orthogroups_2024-Update
Seita.2G429000.1 No alias component *(PsbX) of PS-II complex 0.13 Orthogroups_2024-Update
Sobic.002G414400.1 No alias component *(PsbX) of PS-II complex 0.19 Orthogroups_2024-Update
Sobic.003G055300.1 No alias component *(PsbX) of PS-II complex 0.11 Orthogroups_2024-Update
Solyc05g025600 No alias LOW QUALITY:Photosystem II subunit X (AHRD V3.3 ***... 0.13 Orthogroups_2024-Update
Sopen05g020200 No alias Photosystem II reaction centre X protein (PsbX) 0.15 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR009518 PSII_PsbX 85 122
No external refs found!