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  5. Pp1s116_53V6

Pp1s116_53V6


Description : porphobilinogen deaminase


Gene families : OG_42_0004692 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004692_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Physcomitrella release: Pp1s116_53V6
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Bradi3g05160 No alias hydroxymethylbilane synthase 0.03 Orthogroups_2024-Update
Brara.J02437.1 No alias porphobilinogen deaminase *(HEMC) & EC_2.5 transferase... 0.03 Orthogroups_2024-Update
Cre16.g663900 No alias hydroxymethylbilane synthase 0.05 Orthogroups_2024-Update
Glyma.11G094700 No alias hydroxymethylbilane synthase 0.03 Orthogroups_2024-Update
Glyma.12G021100 No alias hydroxymethylbilane synthase 0.05 Orthogroups_2024-Update
Kfl00058_0350 kfl00058_0350_v1.1 (q43082|hem3_pea : 476.0) Porphobilinogen deaminase,... 0.07 Orthogroups_2024-Update
MA_10437242g0030 No alias (q43082|hem3_pea : 487.0) Porphobilinogen deaminase,... 0.02 Orthogroups_2024-Update
Seita.1G073800.1 No alias porphobilinogen deaminase *(HEMC) & EC_2.5 transferase... 0.02 Orthogroups_2024-Update
Solyc07g066470 No alias Porphobilinogen deaminase, putative (AHRD V3.3 *** B9S2Z0_RICCO) 0.03 Orthogroups_2024-Update
Sopen07g034650 No alias Porphobilinogen deaminase, dipyromethane cofactor binding domain 0.04 Orthogroups_2024-Update
evm.model.tig00000241.50 No alias (q43082|hem3_pea : 177.0) Porphobilinogen deaminase,... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IEA InterProScan predictions
BP GO:0033014 tetrapyrrole biosynthetic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015995 chlorophyll biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR022418 Porphobilinogen_deaminase_C 318 388
IPR022417 Porphobilin_deaminase_N 93 304
No external refs found!