Coexpression cluster: Cluster_63 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044436 thylakoid part 13.89% (10/72) 5.94 0.0 0.0
GO:0009521 photosystem 12.5% (9/72) 5.96 0.0 0.0
GO:0015979 photosynthesis 12.5% (9/72) 5.85 0.0 0.0
GO:0033014 tetrapyrrole biosynthetic process 8.33% (6/72) 6.75 0.0 0.0
GO:0033013 tetrapyrrole metabolic process 8.33% (6/72) 6.54 0.0 0.0
GO:0098796 membrane protein complex 13.89% (10/72) 4.28 0.0 0.0
GO:0009538 photosystem I reaction center 5.56% (4/72) 6.81 0.0 1e-06
GO:0009523 photosystem II 6.94% (5/72) 5.74 0.0 1e-06
GO:0044425 membrane part 16.67% (12/72) 2.74 0.0 5e-06
GO:0009522 photosystem I 5.56% (4/72) 6.28 0.0 5e-06
GO:0044237 cellular metabolic process 30.56% (22/72) 1.77 0.0 5e-06
GO:0009987 cellular process 33.33% (24/72) 1.6 0.0 7e-06
GO:0008152 metabolic process 36.11% (26/72) 1.42 1e-06 2e-05
GO:0008883 glutamyl-tRNA reductase activity 2.78% (2/72) 8.22 1.5e-05 0.000265
GO:0008150 biological_process 41.67% (30/72) 1.07 1.8e-05 0.000297
GO:0009654 photosystem II oxygen evolving complex 4.17% (3/72) 5.44 4.6e-05 0.000721
GO:0032991 protein-containing complex 13.89% (10/72) 2.16 7.5e-05 0.001115
GO:1990204 oxidoreductase complex 4.17% (3/72) 5.04 0.000107 0.001495
GO:0019438 aromatic compound biosynthetic process 8.33% (6/72) 2.91 0.000151 0.001809
GO:0018130 heterocycle biosynthetic process 8.33% (6/72) 2.93 0.00014 0.001853
GO:0005575 cellular_component 22.22% (16/72) 1.47 0.000147 0.001853
GO:0044424 intracellular part 15.28% (11/72) 1.85 0.000216 0.002469
GO:1901362 organic cyclic compound biosynthetic process 8.33% (6/72) 2.8 0.000229 0.002514
GO:0006779 porphyrin-containing compound biosynthetic process 2.78% (2/72) 6.22 0.000319 0.003353
GO:0044464 cell part 15.28% (11/72) 1.76 0.000365 0.003678
GO:0044249 cellular biosynthetic process 12.5% (9/72) 1.97 0.000456 0.00442
GO:0006778 porphyrin-containing compound metabolic process 2.78% (2/72) 5.81 0.000577 0.005387
GO:1901576 organic substance biosynthetic process 12.5% (9/72) 1.92 0.0006 0.0054
GO:0008299 isoprenoid biosynthetic process 2.78% (2/72) 5.64 0.000734 0.006377
GO:0006720 isoprenoid metabolic process 2.78% (2/72) 5.56 0.000819 0.00688
GO:0019898 extrinsic component of membrane 2.78% (2/72) 5.42 0.001003 0.008152
GO:0009058 biosynthetic process 12.5% (9/72) 1.79 0.001109 0.008732
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 2.78% (2/72) 5.28 0.001205 0.0092
GO:0015995 chlorophyll biosynthetic process 1.39% (1/72) 8.81 0.002231 0.015617
GO:0046406 magnesium protoporphyrin IX methyltransferase activity 1.39% (1/72) 8.81 0.002231 0.015617
GO:0003824 catalytic activity 29.17% (21/72) 0.92 0.002198 0.016289
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors 2.78% (2/72) 4.76 0.002478 0.016879
GO:0050661 NADP binding 2.78% (2/72) 4.72 0.002629 0.017437
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 2.78% (2/72) 4.68 0.002785 0.017994
GO:1902494 catalytic complex 4.17% (3/72) 3.32 0.003459 0.020751
GO:0003674 molecular_function 44.44% (32/72) 0.62 0.003424 0.021043
GO:0044255 cellular lipid metabolic process 4.17% (3/72) 3.33 0.003387 0.021338
GO:0015994 chlorophyll metabolic process 1.39% (1/72) 7.81 0.004457 0.023898
GO:0071929 alpha-tubulin acetylation 1.39% (1/72) 7.81 0.004457 0.023898
GO:0019799 tubulin N-acetyltransferase activity 1.39% (1/72) 7.81 0.004457 0.023898
GO:0004655 porphobilinogen synthase activity 1.39% (1/72) 7.81 0.004457 0.023898
GO:1901566 organonitrogen compound biosynthetic process 8.33% (6/72) 1.98 0.004152 0.02433
GO:0004371 glycerone kinase activity 1.39% (1/72) 7.22 0.006678 0.031166
GO:0099081 supramolecular polymer 1.39% (1/72) 7.22 0.006678 0.031166
GO:0099080 supramolecular complex 1.39% (1/72) 7.22 0.006678 0.031166
GO:0004418 hydroxymethylbilane synthase activity 1.39% (1/72) 7.22 0.006678 0.031166
GO:0099513 polymeric cytoskeletal fiber 1.39% (1/72) 7.22 0.006678 0.031166
GO:0099512 supramolecular fiber 1.39% (1/72) 7.22 0.006678 0.031166
GO:0005874 microtubule 1.39% (1/72) 7.22 0.006678 0.031166
GO:0044271 cellular nitrogen compound biosynthetic process 8.33% (6/72) 1.82 0.007097 0.032515
GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity 1.39% (1/72) 6.81 0.008895 0.035579
GO:0006071 glycerol metabolic process 1.39% (1/72) 6.81 0.008895 0.035579
GO:0004853 uroporphyrinogen decarboxylase activity 1.39% (1/72) 6.81 0.008895 0.035579
GO:0019400 alditol metabolic process 1.39% (1/72) 6.81 0.008895 0.035579
GO:0016744 transferase activity, transferring aldehyde or ketonic groups 1.39% (1/72) 6.81 0.008895 0.035579
GO:0010242 oxygen evolving activity 1.39% (1/72) 6.81 0.008895 0.035579
GO:0006725 cellular aromatic compound metabolic process 8.33% (6/72) 1.74 0.009061 0.035679
GO:0046483 heterocycle metabolic process 8.33% (6/72) 1.77 0.00845 0.037359
GO:0016740 transferase activity 13.89% (10/72) 1.26 0.008353 0.037591
GO:1901360 organic cyclic compound metabolic process 8.33% (6/72) 1.71 0.01015 0.03935
GO:0042548 regulation of photosynthesis, light reaction 1.39% (1/72) 6.49 0.011106 0.039419
GO:0005986 sucrose biosynthetic process 1.39% (1/72) 6.49 0.011106 0.039419
GO:0042549 photosystem II stabilization 1.39% (1/72) 6.49 0.011106 0.039419
GO:0010109 regulation of photosynthesis 1.39% (1/72) 6.49 0.011106 0.039419
GO:0043467 regulation of generation of precursor metabolites and energy 1.39% (1/72) 6.49 0.011106 0.039419
GO:0050307 sucrose-phosphate phosphatase activity 1.39% (1/72) 6.49 0.011106 0.039419
GO:0046872 metal ion binding 8.33% (6/72) 1.66 0.011954 0.040707
GO:0005488 binding 27.78% (20/72) 0.74 0.01173 0.041054
GO:0043167 ion binding 16.67% (12/72) 1.05 0.011939 0.041216
GO:0043169 cation binding 8.33% (6/72) 1.65 0.01234 0.041462
GO:0140101 catalytic activity, acting on a tRNA 2.78% (2/72) 3.56 0.012576 0.041701
GO:0016307 phosphatidylinositol phosphate kinase activity 1.39% (1/72) 6.22 0.013313 0.042466
GO:0050308 sugar-phosphatase activity 1.39% (1/72) 6.22 0.013313 0.042466
GO:0019203 carbohydrate phosphatase activity 1.39% (1/72) 6.22 0.013313 0.042466
GO:0016020 membrane 6.94% (5/72) 1.79 0.014741 0.04586
GO:0071704 organic substance metabolic process 19.44% (14/72) 0.91 0.014612 0.046027
GO:0046148 pigment biosynthetic process 1.39% (1/72) 6.0 0.015515 0.047679
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_11 0.028 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_12 0.02 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_58 0.024 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_95 0.037 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_129 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_287 0.027 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_3 0.031 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_18 0.029 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_37 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_44 0.029 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_71 0.031 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_130 0.025 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_179 0.028 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_315 0.048 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_5 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_9 0.042 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_18 0.047 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_89 0.034 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_128 0.036 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_12 0.05 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_13 0.035 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_70 0.033 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_20 0.04 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_52 0.039 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_61 0.059 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_134 0.026 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_1 0.023 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_23 0.043 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_80 0.025 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_5 0.078 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_92 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_101 0.043 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_118 0.029 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_47 0.023 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_67 0.038 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_161 0.02 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_210 0.034 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_47 0.033 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_120 0.038 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_175 0.022 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_715 0.027 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_41 0.024 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_71 0.026 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_88 0.057 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_91 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_202 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_63 0.059 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_108 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_130 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_178 0.037 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_238 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_331 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_360 0.033 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_389 0.041 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_438 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_43 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_86 0.028 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_107 0.036 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_148 0.023 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_23 0.028 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_77 0.024 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0018 0.032 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0050 0.023 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0052 0.025 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0087 0.022 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0107 0.031 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_9 0.069 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_66 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_86 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_96 0.033 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_115 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_133 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_230 0.034 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_287 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_389 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_45 0.025 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_49 0.025 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_101 0.031 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_158 0.032 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_196 0.025 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_4 0.036 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_14 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_23 0.029 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_63 0.028 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_74 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_231 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_232 0.025 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_237 0.072 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_18 0.031 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_43 0.086 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_69 0.028 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_9 0.022 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_19 0.056 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_52 0.027 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_63 0.031 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_81 0.022 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_91 0.025 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_138 0.023 Orthogroups_2024-Update Compare
Sequences (72) (download table)

InterPro Domains

GO Terms

Family Terms