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Description : nuclear pore complex protein-like protein (AHRD V3.3 *-* AT5G05680.1)
Gene families : OG_42_0004498 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004498_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc11g008130 | |
| Cluster | HCCA clusters: Cluster_176 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Glyma.18G028233 | No alias | nuclear pore complex protein-related | 0.02 | Orthogroups_2024-Update | |
| Sobic.006G208400.1 | No alias | scaffold nucleoporin of nuclear pore complex *(NUP88) | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | Predicted GO |
| MF | GO:0004615 | phosphomannomutase activity | IEP | Predicted GO |
| MF | GO:0004618 | phosphoglycerate kinase activity | IEP | Predicted GO |
| MF | GO:0004888 | transmembrane signaling receptor activity | IEP | Predicted GO |
| MF | GO:0004970 | ionotropic glutamate receptor activity | IEP | Predicted GO |
| MF | GO:0005230 | extracellular ligand-gated ion channel activity | IEP | Predicted GO |
| BP | GO:0006013 | mannose metabolic process | IEP | Predicted GO |
| BP | GO:0006302 | double-strand break repair | IEP | Predicted GO |
| BP | GO:0006310 | DNA recombination | IEP | Predicted GO |
| BP | GO:0006396 | RNA processing | IEP | Predicted GO |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
| BP | GO:0006400 | tRNA modification | IEP | Predicted GO |
| BP | GO:0006606 | protein import into nucleus | IEP | Predicted GO |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
| BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
| MF | GO:0008066 | glutamate receptor activity | IEP | Predicted GO |
| BP | GO:0008104 | protein localization | IEP | Predicted GO |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| MF | GO:0008536 | Ran GTPase binding | IEP | Predicted GO |
| MF | GO:0008565 | protein transporter activity | IEP | Predicted GO |
| BP | GO:0009225 | nucleotide-sugar metabolic process | IEP | Predicted GO |
| BP | GO:0009226 | nucleotide-sugar biosynthetic process | IEP | Predicted GO |
| BP | GO:0009298 | GDP-mannose biosynthetic process | IEP | Predicted GO |
| MF | GO:0009975 | cyclase activity | IEP | Predicted GO |
| MF | GO:0009976 | tocopherol cyclase activity | IEP | Predicted GO |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Predicted GO |
| MF | GO:0015923 | mannosidase activity | IEP | Predicted GO |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Predicted GO |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Predicted GO |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
| BP | GO:0017038 | protein import | IEP | Predicted GO |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Predicted GO |
| BP | GO:0019318 | hexose metabolic process | IEP | Predicted GO |
| BP | GO:0019673 | GDP-mannose metabolic process | IEP | Predicted GO |
| MF | GO:0022824 | transmitter-gated ion channel activity | IEP | Predicted GO |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Predicted GO |
| MF | GO:0022835 | transmitter-gated channel activity | IEP | Predicted GO |
| MF | GO:0030594 | neurotransmitter receptor activity | IEP | Predicted GO |
| BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
| BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
| BP | GO:0034504 | protein localization to nucleus | IEP | Predicted GO |
| BP | GO:0034613 | cellular protein localization | IEP | Predicted GO |
| MF | GO:0038023 | signaling receptor activity | IEP | Predicted GO |
| BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
| BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
| BP | GO:0051170 | import into nucleus | IEP | Predicted GO |
| BP | GO:0051205 | protein insertion into membrane | IEP | Predicted GO |
| BP | GO:0051259 | protein complex oligomerization | IEP | Predicted GO |
| BP | GO:0051641 | cellular localization | IEP | Predicted GO |
| MF | GO:0060089 | molecular transducer activity | IEP | Predicted GO |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Predicted GO |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |