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  5. Pp1s117_2V6

Pp1s117_2V6


Description : histone h2b


Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s117_2V6
Cluster HCCA clusters: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
182308 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
At3g46030 No alias Histone H2B [Source:UniProtKB/TrEMBL;Acc:A0A178VGU6] 0.03 Orthogroups_2024-Update
Bradi1g47980 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Brara.J01445.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Cre06.g264800 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre06.g264900 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g265400 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g266750 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g268250 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g274250 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Cre06.g274750 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre06.g276550 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g276900 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre12.g504700 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre12.g505600 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre12.g506200 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre13.g570050 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708600 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g711750 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G046841 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G401147 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G472696 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G141800 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G056530.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
HORVU1Hr1G058440.4 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
HORVU1Hr1G066130.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
HORVU1Hr1G085540.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
HORVU3Hr1G013530.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
MA_77198g0010 No alias (at3g45980 : 157.0) Encodes a histone 2B (H2B) protein.... 0.02 Orthogroups_2024-Update
PSME_00000376-RA No alias (p54347|h2b4_chlre : 153.0) Histone H2B.4 (H2B-IV) -... 0.03 Orthogroups_2024-Update
Seita.2G294900.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
Sobic.003G067500.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Sobic.004G265400.1 No alias histone *(H2B) 0.04 Orthogroups_2024-Update
Sobic.007G149600.1 No alias histone *(H2B) 0.04 Orthogroups_2024-Update
Sopen06g031230 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen06g032230 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen11g003790 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen11g026180 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen12g006850 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
evm.model.contig_498.4 No alias (p16868|h2b4_volca : 127.0) Histone H2B.4 (H2B-IV) -... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006605 protein targeting IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 7 112
No external refs found!