Description : mikc* mads-box transcription factor
Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Physcomitrella release: Pp1s118_161V6 | |
Cluster | HCCA clusters: Cluster_214 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_35435 | No alias | agamous-like mads-box protein agl8 | 0.03 | Orthogroups_2024-Update | |
At2g42830 | No alias | K-box region and MADS-box transcription factor family... | 0.02 | Orthogroups_2024-Update | |
At2g45650 | No alias | AGAMOUS-like protein 6 [Source:UniProtKB/TrEMBL;Acc:Q1PEU3] | 0.02 | Orthogroups_2024-Update | |
Bradi2g31084 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
Bradi4g06867 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
Brara.B01837.1 | No alias | regulatory protein *(AP1/CAL/FUL) of floral meristem... | 0.02 | Orthogroups_2024-Update | |
Brara.C00925.1 | No alias | component *(PISTILLATA) of AP3-PISTILLATA organ-identity... | 0.04 | Orthogroups_2024-Update | |
Brara.C04259.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Brara.D02091.1 | No alias | MADS/AGL-type transcription factor | 0.02 | Orthogroups_2024-Update | |
Brara.I02486.1 | No alias | MADS/AGL-type transcription factor | 0.02 | Orthogroups_2024-Update | |
Brara.J00748.1 | No alias | MADS/AGL-type transcription factor | 0.02 | Orthogroups_2024-Update | |
GRMZM2G159397 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G471089 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
Glyma.14G183800 | No alias | AGAMOUS-like 16 | 0.02 | Orthogroups_2024-Update | |
Glyma.15G058000 | No alias | K-box region and MADS-box transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.16G200700 | No alias | AGAMOUS-like 6 | 0.04 | Orthogroups_2024-Update | |
Glyma.19G047600 | No alias | MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
HORVU5Hr1G095710.1 | No alias | MADS/AGL-type transcription factor | 0.02 | Orthogroups_2024-Update | |
Potri.004G064300 | No alias | K-box region and MADS-box transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
Potri.007G050400 | No alias | AGAMOUS-like 66 | 0.02 | Orthogroups_2024-Update | |
Potri.009G084200 | No alias | AGAMOUS-like 62 | 0.02 | Orthogroups_2024-Update | |
Potri.011G075800 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
Potri.012G062300 | No alias | AGAMOUS-like 8 | 0.02 | Orthogroups_2024-Update | |
Potri.012G100200 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
Potri.014G074200 | No alias | AGAMOUS-like 20 | 0.02 | Orthogroups_2024-Update | |
Potri.017G047300 | No alias | AGAMOUS-like 62 | 0.02 | Orthogroups_2024-Update | |
Pp1s81_202V6 | No alias | mads box | 0.02 | Orthogroups_2024-Update | |
Seita.4G163500.1 | No alias | MADS/AGL-type transcription factor | 0.02 | Orthogroups_2024-Update | |
Seita.6G223700.1 | No alias | MADS/AGL-type transcription factor | 0.02 | Orthogroups_2024-Update | |
evm.model.contig_454.6 | No alias | (at3g57230 : 92.4) MADS-box transcription factor.... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
MF | GO:0046983 | protein dimerization activity | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | Predicted GO |
MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
MF | GO:0004435 | phosphatidylinositol phospholipase C activity | IEP | Predicted GO |
MF | GO:0004497 | monooxygenase activity | IEP | Predicted GO |
MF | GO:0004620 | phospholipase activity | IEP | Predicted GO |
MF | GO:0004629 | phospholipase C activity | IEP | Predicted GO |
MF | GO:0005507 | copper ion binding | IEP | Predicted GO |
MF | GO:0005543 | phospholipid binding | IEP | Predicted GO |
CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
CC | GO:0005665 | RNA polymerase II, core complex | IEP | Predicted GO |
BP | GO:0006366 | transcription by RNA polymerase II | IEP | Predicted GO |
BP | GO:0006536 | glutamate metabolic process | IEP | Predicted GO |
BP | GO:0006537 | glutamate biosynthetic process | IEP | Predicted GO |
MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Predicted GO |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Predicted GO |
MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | Predicted GO |
MF | GO:0015930 | glutamate synthase activity | IEP | Predicted GO |
MF | GO:0016298 | lipase activity | IEP | Predicted GO |
CC | GO:0016592 | mediator complex | IEP | Predicted GO |
MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Predicted GO |
MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | Predicted GO |
CC | GO:0030880 | RNA polymerase complex | IEP | Predicted GO |
MF | GO:0035091 | phosphatidylinositol binding | IEP | Predicted GO |
MF | GO:0043169 | cation binding | IEP | Predicted GO |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Predicted GO |
BP | GO:0043650 | dicarboxylic acid biosynthetic process | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044428 | nuclear part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044451 | nucleoplasm part | IEP | Predicted GO |
MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Predicted GO |
CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | Predicted GO |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002100 | TF_MADSbox | 10 | 57 |
No external refs found! |