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  5. Pp1s118_161V6

Pp1s118_161V6


Description : mikc* mads-box transcription factor


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s118_161V6
Cluster HCCA clusters: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
A4A49_35435 No alias agamous-like mads-box protein agl8 0.03 Orthogroups_2024-Update
At2g42830 No alias K-box region and MADS-box transcription factor family... 0.02 Orthogroups_2024-Update
At2g45650 No alias AGAMOUS-like protein 6 [Source:UniProtKB/TrEMBL;Acc:Q1PEU3] 0.02 Orthogroups_2024-Update
Bradi2g31084 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi4g06867 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Brara.B01837.1 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.02 Orthogroups_2024-Update
Brara.C00925.1 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.04 Orthogroups_2024-Update
Brara.C04259.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.D02091.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I02486.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.J00748.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G159397 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
GRMZM2G471089 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.14G183800 No alias AGAMOUS-like 16 0.02 Orthogroups_2024-Update
Glyma.15G058000 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.16G200700 No alias AGAMOUS-like 6 0.04 Orthogroups_2024-Update
Glyma.19G047600 No alias MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G095710.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Potri.004G064300 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.007G050400 No alias AGAMOUS-like 66 0.02 Orthogroups_2024-Update
Potri.009G084200 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Potri.011G075800 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Potri.012G062300 No alias AGAMOUS-like 8 0.02 Orthogroups_2024-Update
Potri.012G100200 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Potri.014G074200 No alias AGAMOUS-like 20 0.02 Orthogroups_2024-Update
Potri.017G047300 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Pp1s81_202V6 No alias mads box 0.02 Orthogroups_2024-Update
Seita.4G163500.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Seita.6G223700.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
evm.model.contig_454.6 No alias (at3g57230 : 92.4) MADS-box transcription factor.... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005665 RNA polymerase II, core complex IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!