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  5. Pp1s11_401V6

Pp1s11_401V6


Description : ubiquitin ligase protein


Gene families : OG_42_0000717 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s11_401V6
Cluster HCCA clusters: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
A4A49_27287 No alias protein spa1-related 3 0.03 Orthogroups_2024-Update
Glyma.05G214900 No alias SPA1-related 2 0.02 Orthogroups_2024-Update
Kfl00502_0040 kfl00502_0040_v1.1 (at4g11110 : 483.0) Encodes a member of the SPA... 0.02 Orthogroups_2024-Update
Seita.5G302800.1 No alias component *(SPA) of substrate adaptor module of... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 482 517
IPR001680 WD40_repeat 567 602
No external refs found!