Pp1s124_139V6

Description : zinc finger

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s124_139V6
Cluster	HCCA clusters: Cluster_100

Target	Alias	Description	ECC score	Gene Family Method
89924	No alias	cycling DOF factor 1	0.02	Orthogroups_2024-Update
A4A49_13356	No alias	cyclic dof factor 3	0.03	Orthogroups_2024-Update
A4A49_34579	No alias	dof zinc finger protein pbf	0.03	Orthogroups_2024-Update
A4A49_35213	No alias	dof zinc finger protein dof1.7	0.02	Orthogroups_2024-Update
At1g26790	No alias	Dof-type zinc finger DNA-binding family protein...	0.03	Orthogroups_2024-Update
At1g64620	No alias	Dof zinc finger protein DOF1.8...	0.02	Orthogroups_2024-Update
At3g47500	No alias	Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]	0.03	Orthogroups_2024-Update
At5g39660	No alias	Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5]	0.04	Orthogroups_2024-Update
At5g62430	No alias	Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3]	0.06	Orthogroups_2024-Update
Bradi2g09720	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Bradi3g51510	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Brara.C04204.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.D00980.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.E02083.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.F01753.1	No alias	transcription factor *(DOF)	0.06	Orthogroups_2024-Update
Brara.F02115.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.G01458.1	No alias	transcription factor *(DOF)	0.05	Orthogroups_2024-Update
Brara.G02475.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.G02891.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.I02955.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.I03146.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.I05344.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
GRMZM2G064655	No alias	TARGET OF MONOPTEROS 6	0.02	Orthogroups_2024-Update
GRMZM2G134545	No alias	TARGET OF MONOPTEROS 6	0.02	Orthogroups_2024-Update
GRMZM2G142718	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
GRMZM2G394941	No alias	OBF binding protein 4	0.02	Orthogroups_2024-Update
GRMZM2G589696	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.05G025900	No alias	cycling DOF factor 3	0.05	Orthogroups_2024-Update
Glyma.07G193900	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.13G062500	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Glyma.13G237500	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.13G241900	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.13G352000	No alias	DOF zinc finger protein 1	0.03	Orthogroups_2024-Update
Glyma.15G215500	No alias	cycling DOF factor 1	0.02	Orthogroups_2024-Update
Glyma.17G081800	No alias	OBF binding protein 4	0.02	Orthogroups_2024-Update
Glyma.17G101000	No alias	cycling DOF factor 3	0.02	Orthogroups_2024-Update
Glyma.17G180600	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.18G260500	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Glyma.20G035200	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
HORVU1Hr1G074140.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
HORVU2Hr1G017290.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
HORVU4Hr1G059590.2	No alias	transcription factor *(DOF)	0.01	Orthogroups_2024-Update
HORVU4Hr1G074990.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
LOC_Os03g07360	No alias	expressed protein	0.03	Orthogroups_2024-Update
LOC_Os07g48570	No alias	expressed protein	0.02	Orthogroups_2024-Update
MA_18267g0010	No alias	(at5g62940 : 141.0) HCA2 induces the formation of...	0.02	Orthogroups_2024-Update
MA_97259g0020	No alias	(at5g62430 : 134.0) Dof-type zinc finger...	0.02	Orthogroups_2024-Update
PSME_00028077-RA	No alias	(at5g39660 : 211.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
PSME_00041316-RA	No alias	(at5g39660 : 139.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
Potri.004G038800	No alias	OBF binding protein 4	0.02	Orthogroups_2024-Update
Potri.004G121800	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
Potri.015G009300	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Seita.3G371900.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Seita.5G052700.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Seita.9G206300.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Seita.9G525000.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.002G421900.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.009G014400.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Solyc02g067230	No alias	Dof zinc finger protein3	0.02	Orthogroups_2024-Update
Solyc05g007880	No alias	Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA)	0.02	Orthogroups_2024-Update
Solyc06g069760	No alias	Dof zinc finger protein 22	0.02	Orthogroups_2024-Update
Solyc10g086440	No alias	Dof zinc finger protein (AHRD V3.3 *** W9S882_9ROSA)	0.02	Orthogroups_2024-Update
Sopen02g015430	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen02g016410	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen02g021750	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen08g004350	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
MF	GO:0008270	zinc ion binding	IEP	Predicted GO
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Predicted GO
BP	GO:0009439	cyanate metabolic process	IEP	Predicted GO
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predicted GO
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Predicted GO
MF	GO:0016881	acid-amino acid ligase activity	IEP	Predicted GO
BP	GO:0035556	intracellular signal transduction	IEP	Predicted GO
MF	GO:0043167	ion binding	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
BP	GO:0045116	protein neddylation	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
MF	GO:0050662	coenzyme binding	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
MF	GO:0071949	FAD binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	67	121

External Links

No external refs found!

Pp1s124_139V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation