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  5. Pp1s12_364V6

Pp1s12_364V6


Description : zinc finger


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s12_364V6
Cluster HCCA clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
29563 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
A4A49_16781 No alias dof zinc finger protein dof4.6 0.03 Orthogroups_2024-Update
A4A49_28645 No alias dof zinc finger protein dof5.1 0.03 Orthogroups_2024-Update
At1g69570 No alias Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3] 0.02 Orthogroups_2024-Update
At3g55370 No alias OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4] 0.02 Orthogroups_2024-Update
Bradi3g51510 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Bradi4g04260 No alias OBF-binding protein 3 0.02 Orthogroups_2024-Update
Brara.C04204.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.G01458.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.J01378.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
GRMZM2G064655 No alias TARGET OF MONOPTEROS 6 0.03 Orthogroups_2024-Update
GRMZM5G880268 No alias OBF-binding protein 3 0.02 Orthogroups_2024-Update
Glyma.01G021100 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.02G092700 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.05G018100 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Glyma.06G124300 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.11G059300 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.13G230200 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.15G039300 No alias OBF-binding protein 3 0.02 Orthogroups_2024-Update
Glyma.16G145000 No alias OBF binding protein 1 0.02 Orthogroups_2024-Update
Glyma.17G180600 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.19G257500 No alias Dof-type zinc finger DNA-binding family protein 0.05 Orthogroups_2024-Update
HORVU1Hr1G074140.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
HORVU3Hr1G116220.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
LOC_Os02g45200 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g38870 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g48570 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os08g38220 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_175298g0010 No alias (at5g39660 : 214.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
PSME_00004776-RA No alias (at5g60850 : 127.0) Encodes a zinc finger protein.; OBF... 0.03 Orthogroups_2024-Update
PSME_00028077-RA No alias (at5g39660 : 211.0) Dof-type zinc finger... 0.04 Orthogroups_2024-Update
Seita.1G303300.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Seita.5G324400.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Seita.9G525000.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.001G489900.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Sobic.009G153400.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Solyc02g067230 No alias Dof zinc finger protein3 0.03 Orthogroups_2024-Update
Solyc02g088070 No alias Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA) 0.02 Orthogroups_2024-Update
Solyc10g086440 No alias Dof zinc finger protein (AHRD V3.3 *** W9S882_9ROSA) 0.02 Orthogroups_2024-Update
Sopen02g022790 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update
Sopen03g032010 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 61 118
No external refs found!