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  5. Pp1s133_43V6

Pp1s133_43V6


Description : contains ESTs AU095141(E60236),D46574(S11337),AU030788(E60236),AU032607 (S11337) similar to Arabidopsis thaliana chromosome 1, F11I4_4 unknown protein [Oryza sativa (japonica cultivar-group)]


Gene families : OG_42_0001868 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001868_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Physcomitrella release: Pp1s133_43V6
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Bradi2g13590 No alias associated molecule with the SH3 domain of STAM 3 0.02 Orthogroups_2024-Update
GRMZM2G173119 No alias associated molecule with the SH3 domain of STAM 3 0.02 Orthogroups_2024-Update
Glyma.01G030400 No alias associated molecule with the SH3 domain of STAM 2 0.03 Orthogroups_2024-Update
Sopen03g038200 No alias JAB1/Mov34/MPN/PAD-1 ubiquitin protease 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 356 461
No external refs found!