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  5. Solyc11g011240

Solyc11g011240


Description : geranylgeranyl pyrophosphate synthase 1


Gene families : OG_42_0001166 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g011240
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Brara.A00190.1 No alias catalytic component *(IDS11) of geranyl diphosphate... 0.03 Orthogroups_2024-Update
Mp2g13280.1 No alias isoprenyl diphosphate synthase 0.02 Orthogroups_2024-Update
Sopen02g030400 No alias Polyprenyl synthetase 0.04 Orthogroups_2024-Update
Sopen11g006020 No alias Polyprenyl synthetase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
BP GO:0019310 inositol catabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0032957 inositol trisphosphate metabolic process IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0044275 cellular carbohydrate catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
MF GO:0047325 inositol tetrakisphosphate 1-kinase activity IEP Predicted GO
MF GO:0050113 inositol oxygenase activity IEP Predicted GO
MF GO:0051765 inositol tetrakisphosphate kinase activity IEP Predicted GO
MF GO:0051766 inositol trisphosphate kinase activity IEP Predicted GO
MF GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity IEP Predicted GO
MF GO:0052726 inositol-1,3,4-trisphosphate 5-kinase activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 102 335
No external refs found!