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  5. Solyc11g011580

Solyc11g011580


Description : GRAM domain-containing protein / ABA-responsive protein-related (AHRD V3.3 *** A0A061E267_THECC)


Gene families : OG_42_0000247 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g011580
Cluster HCCA clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Bradi4g32570 No alias GRAM domain family protein 0.03 Orthogroups_2024-Update
Brara.F02577.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G106622 No alias GRAM domain family protein 0.03 Orthogroups_2024-Update
Glyma.10G286800 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.03 Orthogroups_2024-Update
Glyma.10G287200 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.03 Orthogroups_2024-Update
Glyma.20G011200 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.03 Orthogroups_2024-Update
Potri.001G323300 No alias GRAM domain family protein 0.03 Orthogroups_2024-Update
Potri.005G088200 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.03 Orthogroups_2024-Update
Seita.2G236200.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000175 3'-5'-exoribonuclease activity IEP Predicted GO
BP GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening IEP Predicted GO
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004532 exoribonuclease activity IEP Predicted GO
MF GO:0004535 poly(A)-specific ribonuclease activity IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
BP GO:0044030 regulation of DNA methylation IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004182 GRAM 106 225
No external refs found!