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  5. Pp1s14_377V6

Pp1s14_377V6


Description : zinc finger


Gene families : OG_42_0000829 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000829_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Physcomitrella release: Pp1s14_377V6
Cluster HCCA clusters: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G111800 No alias DHHC-type zinc finger family protein 0.02 Orthogroups_2024-Update
Potri.008G091700 No alias DHHC-type zinc finger family protein 0.02 Orthogroups_2024-Update
Potri.016G018400 No alias DHHC-type zinc finger family protein 0.05 Orthogroups_2024-Update
Pp1s96_82V6 No alias zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR001594 Palmitoyltrfase_DHHC 173 310
No external refs found!