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  5. Pp1s150_116V6

Pp1s150_116V6


Description : sigma factor sigb regulation protein


Gene families : OG_42_0000569 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s150_116V6
Cluster HCCA clusters: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
Bradi2g14500 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Brara.A02582.1 No alias strigolactone signal transducer *(DLK2) 0.02 Orthogroups_2024-Update
Brara.G00622.1 No alias strigolactone signal transducer *(DLK2) 0.03 Orthogroups_2024-Update
Brara.K01217.1 No alias Unknown function 0.04 Orthogroups_2024-Update
MA_405799g0010 No alias (at3g03990 : 202.0) alpha/beta-Hydrolases superfamily... 0.02 Orthogroups_2024-Update
PSME_00020812-RA No alias (at3g03990 : 274.0) alpha/beta-Hydrolases superfamily... 0.03 Orthogroups_2024-Update
Pp1s116_27V6 No alias sigma factor sigb regulation protein 0.04 Orthogroups_2024-Update
Solyc02g092770 No alias Sigma factor sigb regulation protein rsbq, putative... 0.02 Orthogroups_2024-Update
Sopen05g015210 No alias Alpha/beta hydrolase family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 23 260
No external refs found!