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  5. Pp1s158_178V6

Pp1s158_178V6


Description : autophagy regulatory protein


Gene families : OG_42_0005248 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s158_178V6
Cluster HCCA clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G211600 No alias autophagy 2 0.02 Orthogroups_2024-Update
HORVU6Hr1G034660.8 No alias component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.02 Orthogroups_2024-Update
Kfl00327_0030 kfl00327_0030_v1.1 (at3g19190 : 159.0) Encodes autophagy-related 2 (ATG2).;... 0.01 Orthogroups_2024-Update
MA_10433793g0030 No alias (at3g19190 : 657.0) Encodes autophagy-related 2 (ATG2).;... 0.04 Orthogroups_2024-Update
Mp6g18570.1 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 Orthogroups_2024-Update
PSME_00004633-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00012393-RA No alias (at3g19190 : 788.0) Encodes autophagy-related 2 (ATG2).;... 0.02 Orthogroups_2024-Update
Potri.009G102900 No alias autophagy 2 0.04 Orthogroups_2024-Update
Sopen01g050390 No alias ATG C terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR026854 VPS13_N 9 115
IPR026885 ATG2_CAD_motif 1103 1197
No external refs found!