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  5. Pp1s159_75V6

Pp1s159_75V6


Description : F17L21.13; F-box family protein [Arabidopsis thaliana]


Gene families : OG_42_0000913 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s159_75V6
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g57290 No alias OsFBX153 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_958112g0010 No alias (at1g27340 : 81.6) Galactose oxidase/kelch repeat... 0.03 Orthogroups_2024-Update
Mp2g08820.1 No alias no hits & (original description: none) 0.03 Orthogroups_2024-Update
Mp8g08500.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
CC GO:0005801 cis-Golgi network IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 88 130
No external refs found!