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  5. Pp1s15_152V6

Pp1s15_152V6


Description : 60s ribosomal protein l23


Gene families : OG_42_0001290 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s15_152V6
Cluster HCCA clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
165708 No alias Ribosomal protein L14p/L23e family protein 0.05 Orthogroups_2024-Update
A4A49_26558 No alias 60s ribosomal protein l23 0.04 Orthogroups_2024-Update
Bradi1g75790 No alias Ribosomal protein L14p/L23e family protein 0.07 Orthogroups_2024-Update
Bradi3g28300 No alias Ribosomal protein L14p/L23e family protein 0.06 Orthogroups_2024-Update
Bradi3g55140 No alias Ribosomal protein L14p/L23e family protein 0.06 Orthogroups_2024-Update
Brara.A03771.1 No alias component *(uL14) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Brara.C03052.1 No alias component *(uL14) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Brara.E03449.1 No alias component *(uL14) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Brara.H03046.1 No alias component *(uL14) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.I05490.1 No alias component *(uL14) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Brara.J00259.1 No alias component *(uL14) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Cre04.g211800 No alias Ribosomal protein L14p/L23e family protein 0.11 Orthogroups_2024-Update
GRMZM2G123495 No alias Ribosomal protein L14p/L23e family protein 0.05 Orthogroups_2024-Update
GRMZM2G150058 No alias Ribosomal protein L14p/L23e family protein 0.03 Orthogroups_2024-Update
GRMZM2G171181 No alias Ribosomal protein L14p/L23e family protein 0.03 Orthogroups_2024-Update
Glyma.10G039900 No alias Ribosomal protein L14p/L23e family protein 0.03 Orthogroups_2024-Update
Glyma.13G126400 No alias Ribosomal protein L14p/L23e family protein 0.1 Orthogroups_2024-Update
Glyma.19G167800 No alias Ribosomal protein L14p/L23e family protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G039160.1 No alias component *(uL14) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
HORVU4Hr1G083840.1 No alias component *(uL14) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
HORVU6Hr1G090170.1 No alias component *(uL14) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Kfl00761_0070 kfl00761_0070_v1.1 (at3g04400 : 234.0) embryo defective 2171 (emb2171);... 0.04 Orthogroups_2024-Update
LOC_Os10g32920 No alias ribosomal protein, putative, expressed 0.01 Orthogroups_2024-Update
MA_10432200g0010 No alias (at3g04400 : 278.0) embryo defective 2171 (emb2171);... 0.04 Orthogroups_2024-Update
Mp6g14310.1 No alias component RPL23 of LSU proteome component 0.1 Orthogroups_2024-Update
PSME_00015897-RA No alias (at3g04400 : 271.0) embryo defective 2171 (emb2171);... 0.04 Orthogroups_2024-Update
Potri.002G257500 No alias Ribosomal protein L14p/L23e family protein 0.05 Orthogroups_2024-Update
Potri.010G066400 No alias Ribosomal protein L14p/L23e family protein 0.02 Orthogroups_2024-Update
Pp1s280_69V6 No alias 60s ribosomal protein l23 0.08 Orthogroups_2024-Update
Seita.1G363100.1 No alias component *(uL14) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Seita.9G228700.1 No alias component *(uL14) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Seita.9G546200.1 No alias component *(uL14) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Sobic.001G510800.1 No alias component *(uL14) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Sobic.004G342400.1 No alias component *(uL14) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Solyc06g008170 No alias 50S ribosomal protein L14 (AHRD V3.3 *** A0A0K9PMD0_ZOSMR) 0.02 Orthogroups_2024-Update
Solyc06g083780 No alias 50S ribosomal protein L14 (AHRD V3.3 *** A0A0K9PMD0_ZOSMR) 0.05 Orthogroups_2024-Update
Solyc09g072870 No alias 50S ribosomal protein L14 (AHRD V3.3 *** A0A0K9PMD0_ZOSMR) 0.06 Orthogroups_2024-Update
Solyc09g090610 No alias 50S ribosomal protein L14 (AHRD V3.3 *** A0A0K9PMD0_ZOSMR) 0.03 Orthogroups_2024-Update
Sopen06g035190 No alias Ribosomal protein L14p/L23e 0.08 Orthogroups_2024-Update
Sopen09g028670 No alias Ribosomal protein L14p/L23e 0.09 Orthogroups_2024-Update
Sopen09g033550 No alias Ribosomal protein L14p/L23e 0.06 Orthogroups_2024-Update
evm.model.contig_548.2 No alias (at3g04400 : 225.0) embryo defective 2171 (emb2171);... 0.11 Orthogroups_2024-Update
evm.model.tig00021290.9 No alias (at3g04400 : 253.0) embryo defective 2171 (emb2171);... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005740 mitochondrial envelope IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006164 purine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006754 ATP biosynthetic process IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009123 nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009141 nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
BP GO:0009260 ribonucleotide biosynthetic process IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
CC GO:0031967 organelle envelope IEP Predicted GO
CC GO:0031975 envelope IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
BP GO:0046034 ATP metabolic process IEP Predicted GO
BP GO:0046390 ribose phosphate biosynthetic process IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:0072522 purine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000218 Ribosomal_L14P 22 140
No external refs found!