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  5. Pp1s15_323V6

Pp1s15_323V6


Description : plastidppgpp synthase


Gene families : OG_42_0003311 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003311_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s15_323V6
Cluster HCCA clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Bradi3g37620 No alias RELA/SPOT homolog 3 0.02 Orthogroups_2024-Update
LOC_Os08g35620 No alias HD domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G168200 No alias RELA/SPOT homolog 3 0.02 Orthogroups_2024-Update
Solyc03g123370 No alias RelA/SpoT-like protein (AHRD V3.3 *** A8DD65_IPONI) 0.04 Orthogroups_2024-Update
evm.model.tig00000545.31 No alias (at1g54130 : 190.0) RELA/SPOT homolog 3 (RSH3);... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0015969 guanosine tetraphosphate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003607 HD/PDEase_dom 332 487
IPR007685 RelA_SpoT 545 655
No external refs found!