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Description : lycopene beta-cyclase
Gene families : OG_42_0003857 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003857_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Physcomitrella release: Pp1s160_155V6 | |
| Cluster | HCCA clusters: Cluster_102 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Glyma.03G128900 | No alias | lycopene cyclase | 0.02 | Orthogroups_2024-Update | |
| Solyc04g040190 | No alias | lycopene beta-cyclase | 0.02 | Orthogroups_2024-Update | |
| Sopen04g009940 | No alias | Lycopene cyclase protein | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Predicted GO |
| MF | GO:0003674 | molecular_function | IEP | Predicted GO |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Predicted GO |
| MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Predicted GO |
| MF | GO:0004418 | hydroxymethylbilane synthase activity | IEP | Predicted GO |
| MF | GO:0004655 | porphobilinogen synthase activity | IEP | Predicted GO |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Predicted GO |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0008152 | metabolic process | IEP | Predicted GO |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Predicted GO |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Predicted GO |
| MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
| MF | GO:0008716 | D-alanine-D-alanine ligase activity | IEP | Predicted GO |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Predicted GO |
| CC | GO:0009521 | photosystem | IEP | Predicted GO |
| CC | GO:0009523 | photosystem II | IEP | Predicted GO |
| BP | GO:0009987 | cellular process | IEP | Predicted GO |
| BP | GO:0015979 | photosynthesis | IEP | Predicted GO |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Predicted GO |
| BP | GO:0015995 | chlorophyll biosynthetic process | IEP | Predicted GO |
| MF | GO:0016740 | transferase activity | IEP | Predicted GO |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Predicted GO |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
| MF | GO:0016836 | hydro-lyase activity | IEP | Predicted GO |
| MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Predicted GO |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Predicted GO |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | Predicted GO |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Predicted GO |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Predicted GO |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
| MF | GO:0019842 | vitamin binding | IEP | Predicted GO |
| MF | GO:0030145 | manganese ion binding | IEP | Predicted GO |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | Predicted GO |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predicted GO |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predicted GO |
| BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
| CC | GO:0044436 | thylakoid part | IEP | Predicted GO |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Predicted GO |
| MF | GO:0046406 | magnesium protoporphyrin IX methyltransferase activity | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
| MF | GO:0070279 | vitamin B6 binding | IEP | Predicted GO |
| BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
| CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |