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  5. Pp1s160_156V6

Pp1s160_156V6


Description : poly + rna transport protein


Gene families : OG_42_0001467 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s160_156V6
Cluster HCCA clusters: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
A4A49_17499 No alias ubiquitin-activating enzyme e1 1 0.02 Orthogroups_2024-Update
Cre09.g386400 No alias ubiquitin activating enzyme 2 0.01 Orthogroups_2024-Update
HORVU5Hr1G047790.1 No alias E1 ubiquitin-activating enzyme 0.03 Orthogroups_2024-Update
Kfl00533_0100 kfl00533_0100_v1.1 (p31251|ube12_wheat : 672.0) Ubiquitin-activating enzyme... 0.02 Orthogroups_2024-Update
Mp7g08080.1 No alias ubiquitin-activating E1 protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000594 ThiF_NAD_FAD-bd 496 996
IPR000594 ThiF_NAD_FAD-bd 32 476
IPR018965 Ub-activating_enz_E1_C 1015 1108
IPR032418 E1_FCCH 206 274
IPR019572 UBA_E1_Cys 684 939
IPR032420 E1_4HB 277 349
No external refs found!