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  5. Pp1s163_87V6

Pp1s163_87V6


Description : geranylgeranyl transferase type ii beta


Gene families : OG_42_0004916 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004916_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s163_87V6
Cluster HCCA clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Brara.J02169.1 No alias subunit beta of RAB-GTPase geranylgeranyltransferase... 0.03 Orthogroups_2024-Update
LOC_Os08g40140 No alias geranylgeranyl transferase type-2 subunit beta,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001330 PFTB_repeat 51 92
IPR001330 PFTB_repeat 243 287
IPR001330 PFTB_repeat 100 141
IPR001330 PFTB_repeat 147 188
IPR001330 PFTB_repeat 196 237
No external refs found!