Pp1s167_8V6

Description : dna binding

Gene families : OG_42_0001074 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001074_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s167_8V6
Cluster	HCCA clusters: Cluster_112

Target	Alias	Description	ECC score	Gene Family Method
GRMZM2G111123	No alias	AP2/B3-like transcriptional factor family protein	0.02	Orthogroups_2024-Update
HORVU2Hr1G029110.2	No alias	REM-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G204200.1	No alias	REM-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.K044414.1	No alias	REM-type transcription factor	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000439	transcription factor TFIIH core complex	IEP	Predicted GO
CC	GO:0005667	transcription factor complex	IEP	Predicted GO
BP	GO:0006289	nucleotide-excision repair	IEP	Predicted GO
MF	GO:0043015	gamma-tubulin binding	IEP	Predicted GO
CC	GO:0044798	nuclear transcription factor complex	IEP	Predicted GO
MF	GO:0045735	nutrient reservoir activity	IEP	Predicted GO
CC	GO:0090575	RNA polymerase II transcription factor complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	131	219

External Links

No external refs found!