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  5. Pp1s169_25V6

Pp1s169_25V6


Description : white-brown-complex abc transporter family


Gene families : OG_42_0000429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s169_25V6
Cluster HCCA clusters: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
At1g31770 No alias ABC transporter G family member 14... 0.03 Orthogroups_2024-Update
Brara.A01710.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Brara.A03279.1 No alias sporopollenin precursor exporter *(ABCG26) & subfamily... 0.03 Orthogroups_2024-Update
Brara.D00598.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Brara.F03336.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Brara.G03089.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.02G302200 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
Glyma.10G205600 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
Pp1s138_50V6 No alias white-brown-complex abc transporter family 0.02 Orthogroups_2024-Update
Pp1s270_82V6 No alias white-brown-complex abc transporter family 0.05 Orthogroups_2024-Update
Solyc07g065770 No alias ABC transporter family protein (AHRD V3.3 *-* B9GG01_POPTR) 0.02 Orthogroups_2024-Update
Solyc11g018690 No alias ABC transporter family protein (AHRD V3.3 *-* B9IQI5_POPTR) 0.03 Orthogroups_2024-Update
Solyc12g013630 No alias ABC transporter G family member (AHRD V3.3 *** A0A0K9Q0M2_ZOSMR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 90 241
IPR013525 ABC_2_trans 397 602
No external refs found!