1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s172_90V6

Pp1s172_90V6


Description : predicted protein [Populus trichocarpa]


Gene families : OG_42_0000906 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000906_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s172_90V6
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Potri.004G216200 No alias Domain of unknown function (DUF966) 0.03 Orthogroups_2024-Update
Solyc04g054800 No alias UPSTREAM OF FLC protein (DUF966) (AHRD V3.3 *** AT5G10150.4) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR010369 DUF966 28 299
No external refs found!