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  5. Pp1s177_13V6

Pp1s177_13V6


Description : chlorophyll a b binding


Gene families : OG_42_0000070 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s177_13V6
Cluster HCCA clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
423144 No alias photosystem I light harvesting complex gene 1 0.02 Orthogroups_2024-Update
446130 No alias photosystem I light harvesting complex gene 2 0.03 Orthogroups_2024-Update
75552 No alias photosystem II light harvesting complex gene 2.1 0.01 Orthogroups_2024-Update
A4A49_03871 No alias chlorophyll a-b binding protein 36, chloroplastic 0.04 Orthogroups_2024-Update
A4A49_12650 No alias chlorophyll a-b binding protein 6a, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_14365 No alias chlorophyll a-b binding protein 21, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_33198 No alias chlorophyll a-b binding protein p4, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_61087 No alias chlorophyll a-b binding protein 50, chloroplastic 0.04 Orthogroups_2024-Update
A4A49_64136 No alias chlorophyll a-b binding protein 13, chloroplastic 0.03 Orthogroups_2024-Update
Bradi1g23610 No alias photosystem I light harvesting complex gene 2 0.03 Orthogroups_2024-Update
Bradi1g42670 No alias photosystem I light harvesting complex gene 1 0.03 Orthogroups_2024-Update
Bradi2g16271 No alias chlorophyll A/B binding protein 1 0.02 Orthogroups_2024-Update
Bradi2g16290 No alias photosystem II light harvesting complex gene B1B2 0.05 Orthogroups_2024-Update
Bradi3g58020 No alias photosystem I light harvesting complex gene 5 0.02 Orthogroups_2024-Update
Bradi4g27480 No alias Chlorophyll A-B binding family protein 0.03 Orthogroups_2024-Update
Bradi4g31257 No alias photosystem I light harvesting complex gene 6 0.02 Orthogroups_2024-Update
Brara.B01393.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.B03307.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.C01741.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.C02638.1 No alias component *(LHCb5) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.D00100.1 No alias component *(LHCa2) of LHC-I complex 0.04 Orthogroups_2024-Update
Brara.D02090.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Brara.E00981.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Brara.E00982.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.F01756.1 No alias component *(LHCa4) of LHC-I complex 0.03 Orthogroups_2024-Update
Brara.F03187.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.G01647.1 No alias component *(LHCa1) of LHC-I complex 0.03 Orthogroups_2024-Update
Brara.G01921.1 No alias component *(LHCa2) of LHC-I complex 0.03 Orthogroups_2024-Update
Brara.H01921.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.I00297.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.I02349.1 No alias component *(LHCb5) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.I02856.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.04 Orthogroups_2024-Update
Brara.I02857.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.05 Orthogroups_2024-Update
Brara.I03747.1 No alias component *(LHCa1) of LHC-I complex 0.02 Orthogroups_2024-Update
Brara.J00907.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Brara.K00763.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Cre04.g232104 No alias photosystem II light harvesting complex gene 2.1 0.02 Orthogroups_2024-Update
Cre06.g272650 No alias photosystem I light harvesting complex gene 5 0.03 Orthogroups_2024-Update
Cre06.g278213 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.04 Orthogroups_2024-Update
Cre06.g283050 No alias photosystem I light harvesting complex gene 1 0.05 Orthogroups_2024-Update
Cre06.g283950 No alias photosystem II light harvesting complex gene 2.1 0.02 Orthogroups_2024-Update
Cre06.g285250 No alias photosystem II light harvesting complex gene 2.1 0.05 Orthogroups_2024-Update
Cre07.g344950 No alias photosystem I light harvesting complex gene 5 0.04 Orthogroups_2024-Update
Cre10.g425900 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.04 Orthogroups_2024-Update
Cre10.g452050 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.04 Orthogroups_2024-Update
Cre12.g508750 No alias photosystem I light harvesting complex gene 6 0.04 Orthogroups_2024-Update
Cre12.g548400 No alias photosystem II light harvesting complex gene 2.2 0.02 Orthogroups_2024-Update
Cre16.g673650 No alias light harvesting complex of photosystem II 5 0.04 Orthogroups_2024-Update
Cre16.g687900 No alias photosystem I light harvesting complex gene 5 0.05 Orthogroups_2024-Update
Glyma.02G064700 No alias photosystem I light harvesting complex gene 1 0.02 Orthogroups_2024-Update
Glyma.02G305400 No alias photosystem II light harvesting complex gene 2.1 0.03 Orthogroups_2024-Update
Glyma.03G262300 No alias photosystem I light harvesting complex gene 2 0.05 Orthogroups_2024-Update
Glyma.06G194900 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.02 Orthogroups_2024-Update
Glyma.07G047600 No alias photosystem I light harvesting complex gene 2 0.04 Orthogroups_2024-Update
Glyma.09G154700 No alias light harvesting complex of photosystem II 5 0.02 Orthogroups_2024-Update
Glyma.12G219300 No alias light-harvesting chlorophyll B-binding protein 3 0.02 Orthogroups_2024-Update
Glyma.14G008000 No alias photosystem II light harvesting complex gene 2.1 0.03 Orthogroups_2024-Update
Glyma.16G016100 No alias photosystem I light harvesting complex gene 2 0.02 Orthogroups_2024-Update
Glyma.16G205200 No alias light harvesting complex of photosystem II 5 0.04 Orthogroups_2024-Update
Glyma.20G212900 No alias light harvesting complex of photosystem II 5 0.02 Orthogroups_2024-Update
HORVU2Hr1G040780.4 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
HORVU5Hr1G054000.1 No alias component *(LHCq) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU5Hr1G066280.1 No alias component *(LHCa4) of LHC-I complex 0.02 Orthogroups_2024-Update
HORVU5Hr1G082420.2 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
HORVU7Hr1G040380.5 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Kfl00009_0500 kfl00009_0500_v1.... (p13869|cb12_pethy : 139.0) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
Kfl00009_0510 kfl00009_0510_v1.1 (at3g54890 : 130.0) Encodes a component of the light... 0.02 Orthogroups_2024-Update
Kfl00023_0070 kfl00023_0070_v1.1 (at3g47470 : 285.0) Encodes a chlorophyll a/b-binding... 0.05 Orthogroups_2024-Update
Kfl00098_0080 kfl00098_0080_v1.1 (p27495|cb24_tobac : 391.0) Chlorophyll a-b binding... 0.03 Orthogroups_2024-Update
Kfl00098_0090 kfl00098_0090_v1.1 (p27495|cb24_tobac : 389.0) Chlorophyll a-b binding... 0.03 Orthogroups_2024-Update
Kfl00100_0170 kfl00100_0170_v1.1 (at3g54890 : 240.0) Encodes a component of the light... 0.02 Orthogroups_2024-Update
Kfl00104_0350 kfl00104_0350_v1.1 (at4g10340 : 325.0) photosystem II encoding the... 0.04 Orthogroups_2024-Update
Kfl00120_0160 kfl00120_0160_v1.1 (p12470|cb25_nicpl : 340.0) Chlorophyll a-b binding... 0.04 Orthogroups_2024-Update
Kfl00214_0160 kfl00214_0160_v1.1 (at1g45474 : 233.0) Encodes a component of the light... 0.04 Orthogroups_2024-Update
Kfl00517_0030 kfl00517_0030_v1.... (at3g54890 : 129.0) Encodes a component of the light... 0.02 Orthogroups_2024-Update
Kfl00517_0040 kfl00517_0040_v1.1 (at3g54890 : 116.0) Encodes a component of the light... 0.03 Orthogroups_2024-Update
Kfl00564_0030 kfl00564_0030_v1.1 (p13869|cb12_pethy : 291.0) Chlorophyll a-b binding... 0.06 Orthogroups_2024-Update
Kfl01434_0010 kfl01434_0010_v1.1 (p27493|cb22_tobac : 410.0) Chlorophyll a-b binding... 0.03 Orthogroups_2024-Update
LOC_Os01g41710 No alias chlorophyll A-B binding protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g33820 No alias chlorophyll A-B binding protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g12540 No alias chlorophyll A-B binding protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10431300g0020 No alias (p10049|cb21_pinth : 457.0) Chlorophyll a-b binding... 0.03 Orthogroups_2024-Update
MA_131587g0010 No alias (p15194|cb2b_pinsy : 453.0) Chlorophyll a-b binding... 0.04 Orthogroups_2024-Update
MA_267089g0010 No alias (p10049|cb21_pinth : 242.0) Chlorophyll a-b binding... 0.03 Orthogroups_2024-Update
MA_65346g0010 No alias (at3g47470 : 317.0) Encodes a chlorophyll a/b-binding... 0.03 Orthogroups_2024-Update
MA_97315g0010 No alias (p15193|cb2a_pinsy : 556.0) Chlorophyll a-b binding... 0.03 Orthogroups_2024-Update
Mp1g29620.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Mp2g15420.1 No alias component LHCa1 of LHC-I complex 0.04 Orthogroups_2024-Update
Mp3g07840.1 No alias component LHCa4 of LHC-I complex 0.03 Orthogroups_2024-Update
Mp4g10900.1 No alias component LHCb5 of LHC-II complex 0.04 Orthogroups_2024-Update
Mp7g05880.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Orthogroups_2024-Update
Mp7g05890.1 No alias component LHCb1/2/3 of LHC-II complex 0.05 Orthogroups_2024-Update
Mp7g05980.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 Orthogroups_2024-Update
Mp7g06710.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Mp7g06720.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Mp7g06730.1 No alias component LHCb1/2/3 of LHC-II complex 0.05 Orthogroups_2024-Update
Mp7g06750.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 Orthogroups_2024-Update
Mp7g06760.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 Orthogroups_2024-Update
Mp7g06770.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Orthogroups_2024-Update
Mp7g06780.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Mp7g08940.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 Orthogroups_2024-Update
Mp7g09180.1 No alias component LHCb1/2/3 of LHC-II complex 0.05 Orthogroups_2024-Update
Mp8g13180.1 No alias component LHCa2 of LHC-I complex 0.05 Orthogroups_2024-Update
Potri.005G258600 No alias Chlorophyll A-B binding family protein 0.02 Orthogroups_2024-Update
Pp1s628_7V6 No alias light-harvesting complex ii protein lhcb5 0.03 Orthogroups_2024-Update
Pp1s651_2V6 No alias chlorophyll a-b binding protein 0.02 Orthogroups_2024-Update
Seita.1G330600.1 No alias linker protein *(LHCa5) between PS-I complex and NDH complex 0.02 Orthogroups_2024-Update
Seita.3G143800.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Seita.4G139900.1 No alias component *(LHCa1) of LHC-I complex 0.05 Orthogroups_2024-Update
Seita.5G215600.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Sobic.001G177000.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Sobic.002G159100.1 No alias component *(LHCq) of LHC-II complex 0.02 Orthogroups_2024-Update
Sobic.002G288300.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Sobic.002G339200.2 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Sobic.002G352100.1 No alias component *(LHCa2) of LHC-I complex 0.03 Orthogroups_2024-Update
Sobic.003G209800.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.05 Orthogroups_2024-Update
Sobic.003G209900.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Sobic.004G056900.1 No alias component *(LHCa1) of LHC-I complex 0.03 Orthogroups_2024-Update
Sobic.005G087000.1 No alias component *(LHCb5) of LHC-II complex 0.02 Orthogroups_2024-Update
Sobic.007G136900.1 No alias component *(LHCa4) of LHC-I complex 0.04 Orthogroups_2024-Update
Sobic.009G234600.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.04 Orthogroups_2024-Update
Solyc02g070950 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.02 Orthogroups_2024-Update
Solyc02g070990 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.03 Orthogroups_2024-Update
Solyc03g005780 No alias chlorophyll a/b-binding protein Cab-3C 0.02 Orthogroups_2024-Update
Solyc03g115900 No alias chlorophyll a-b binding protein CAB11 0.03 Orthogroups_2024-Update
Solyc04g082920 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.02 Orthogroups_2024-Update
Solyc05g056070 No alias photosystem 1 protein 0.02 Orthogroups_2024-Update
Solyc06g069730 No alias chlorophyll a-b binding protein Cab12 0.03 Orthogroups_2024-Update
Solyc07g047850 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update
Solyc07g063600 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.02 Orthogroups_2024-Update
Solyc12g006140 No alias Cab-5 gene encoding chlorophyll a/b-binding protein 0.03 Orthogroups_2024-Update
Solyc12g009200 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.03 Orthogroups_2024-Update
Solyc12g011450 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.03 Orthogroups_2024-Update
Sopen02g020020 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen02g020030 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen02g020040 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen02g020050 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen02g020060 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen02g020070 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen02g020080 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen03g001780 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen03g001790 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen03g034880 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen04g036560 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen06g022840 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen07g024290 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen07g031780 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen08g021280 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update
Sopen10g002190 No alias Chlorophyll A-B binding protein 0.05 Orthogroups_2024-Update
Sopen12g004150 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
Sopen12g006800 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update
evm.model.contig_2142.1 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.contig_2493.3 No alias (p27523|cb23_horvu : 90.9) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
evm.model.contig_3421.1 No alias (at3g54890 : 82.4) Encodes a component of the light... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 69 234
No external refs found!