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  5. Solyc11g020180

Solyc11g020180


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151U9T1_CAJCA)


Gene families : OG_42_0004498 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004498_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g020180
Cluster HCCA clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Cre06.g278900 No alias nuclear pore complex protein-related 0.02 Orthogroups_2024-Update
Potri.008G067600 No alias nuclear pore complex protein-related 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013103 RVT_2 355 398
No external refs found!