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  5. Pp1s180_116V6

Pp1s180_116V6


Description : 60s ribosomal protein


Gene families : OG_42_0001702 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001702_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Physcomitrella release: Pp1s180_116V6
Cluster HCCA clusters: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
270704 No alias Ribosomal L22e protein family 0.03 Orthogroups_2024-Update
A4A49_00389 No alias 60s ribosomal protein l22-2 0.02 Orthogroups_2024-Update
At3g05560 No alias 60S ribosomal protein L22-2... 0.02 Orthogroups_2024-Update
Bradi1g62830 No alias Ribosomal L22e protein family 0.02 Orthogroups_2024-Update
Brara.E03358.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.F02844.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.J00134.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Cre07.g357850 No alias Ribosomal L22e protein family 0.01 Orthogroups_2024-Update
GRMZM2G134107 No alias Ribosomal L22e protein family 0.01 Orthogroups_2024-Update
Glyma.20G237000 No alias Ribosomal L22e protein family 0.03 Orthogroups_2024-Update
HORVU7Hr1G080630.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Potri.005G024400 No alias Ribosomal L22e protein family 0.02 Orthogroups_2024-Update
Pp1s283_20V6 No alias 60s ribosomal protein 0.01 Orthogroups_2024-Update
Pp1s457_15V6 No alias 60s ribosomal protein 0.05 Orthogroups_2024-Update
Seita.2G429500.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Seita.9G409100.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Sobic.001G376600.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Sobic.002G414700.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.01 Orthogroups_2024-Update
Sopen01g043340 No alias Ribosomal L22e protein family 0.01 Orthogroups_2024-Update
Sopen09g029980 No alias Ribosomal L22e protein family 0.02 Orthogroups_2024-Update
evm.model.contig_2121.19 No alias (at3g05560 : 87.0) Ribosomal L22e protein family;... 0.03 Orthogroups_2024-Update
evm.model.tig00001206.7 No alias (at3g05560 : 112.0) Ribosomal L22e protein family;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 18 127
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