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Description : zinc finger (c3hc4-type ring finger) family protein
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Physcomitrella release: Pp1s185_21V6 | |
| Cluster | HCCA clusters: Cluster_297 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi1g60390 | No alias | hypoxia-responsive family protein / zinc finger... | 0.05 | Orthogroups_2024-Update | |
| Bradi2g06880 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.B00007.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.C01887.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Brara.F00385.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.F00390.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.G01336.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.05 | Orthogroups_2024-Update | |
| Glyma.04G098100 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.09G275300 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.18G176200 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Kfl00034_0310 | kfl00034_0310_v1.1 | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
| LOC_Os01g11490 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os02g14990 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.01 | Orthogroups_2024-Update | |
| LOC_Os02g33720 | No alias | RING-H2 finger protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os05g11860 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.01 | Orthogroups_2024-Update | |
| LOC_Os12g02220 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| PSME_00003016-RA | No alias | (at1g72200 : 114.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| Potri.005G113200 | No alias | receptor homology region transmembrane domain ring H2... | 0.03 | Orthogroups_2024-Update | |
| Seita.1G017900.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.06 | Orthogroups_2024-Update | |
| Sobic.004G187800.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G251000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G251100.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.009G110500.2 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Solyc06g061250 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update | |
| Sopen01g040370 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
| MF | GO:0003774 | motor activity | IEP | Predicted GO |
| MF | GO:0003777 | microtubule motor activity | IEP | Predicted GO |
| MF | GO:0005524 | ATP binding | IEP | Predicted GO |
| BP | GO:0006468 | protein phosphorylation | IEP | Predicted GO |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Predicted GO |
| BP | GO:0007017 | microtubule-based process | IEP | Predicted GO |
| BP | GO:0007018 | microtubule-based movement | IEP | Predicted GO |
| MF | GO:0008017 | microtubule binding | IEP | Predicted GO |
| MF | GO:0008144 | drug binding | IEP | Predicted GO |
| MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
| MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
| MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
| MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
| MF | GO:0043168 | anion binding | IEP | Predicted GO |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 119 | 163 |
| No external refs found! |