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  5. Solyc11g022460

Solyc11g022460


Description : C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** AT1G22610.1)


Gene families : OG_42_0000144 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g022460
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
A4A49_21889 No alias ft-interacting protein 1 0.03 Orthogroups_2024-Update
GRMZM2G108149 No alias Calcium-dependent lipid-binding (CaLB domain) plant... 0.05 Orthogroups_2024-Update
Glyma.05G029600 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 Orthogroups_2024-Update
Glyma.11G130400 No alias Calcium-dependent lipid-binding (CaLB domain) plant... 0.02 Orthogroups_2024-Update
MA_10436986g0010 No alias (at1g74720 : 144.0) Encodes a putative transmembrane... 0.03 Orthogroups_2024-Update
Potri.016G113800 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.04 Orthogroups_2024-Update
Sopen01g003150 No alias Plant phosphoribosyltransferase C-terminal 0.03 Orthogroups_2024-Update
Sopen11g011470 No alias Plant phosphoribosyltransferase C-terminal 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 536 642
IPR000008 C2_dom 3 91
IPR000008 C2_dom 371 467
IPR000008 C2_dom 210 311
IPR013583 PRibTrfase_C 787 942
No external refs found!