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  5. Pp1s194_88V6

Pp1s194_88V6


Description : contains ESTs AU101327(E10918),AU069872(E10918),D39953(S1639) [Oryza sativa (japonica cultivar-group)]


Gene families : OG_42_0000125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s194_88V6
Cluster HCCA clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
A4A49_14046 No alias transcription factor bhlh74 0.02 Orthogroups_2024-Update
A4A49_19416 No alias transcription factor bhlh49 0.02 Orthogroups_2024-Update
At2g42300 No alias Transcription factor bHLH48... 0.03 Orthogroups_2024-Update
Glyma.02G174800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G012200 No alias cryptochrome-interacting basic-helix-loop-helix 1 0.02 Orthogroups_2024-Update
HORVU7Hr1G052870.15 No alias regulatory protein (CIB) of blue light perception &... 0.02 Orthogroups_2024-Update
Seita.5G426500.1 No alias regulatory protein (CIB) of blue light perception &... 0.02 Orthogroups_2024-Update
Sopen05g002590 No alias Helix-loop-helix DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 276 323
No external refs found!