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  5. Pp1s19_204V6

Pp1s19_204V6


Description : T12J13.15; expressed protein [Arabidopsis thaliana]


Gene families : OG_42_0002612 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002612_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s19_204V6
Cluster HCCA clusters: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
At3g03570 No alias Signal transducer, putative (DUF3550/UPF0682)... 0.03 Orthogroups_2024-Update
Glyma.05G175900 No alias Protein of unknown function (DUF3550/UPF0682) 0.01 Orthogroups_2024-Update
Solyc11g010240 No alias Histone H3 (AHRD V3.3 *-* K7VSQ3_MAIZE) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003714 transcription corepressor activity IEA InterProScan predictions
BP GO:0006351 transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR022709 SCAI 15 337
No external refs found!