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  5. Pp1s1_304V6

Pp1s1_304V6


Description : 40s ribosomal protein s15a


Gene families : OG_42_0001161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001161_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s1_304V6
Cluster HCCA clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
228163 No alias Ribosomal protein S8 family protein 0.07 Orthogroups_2024-Update
At5g59850 No alias AT1G07770 protein [Source:UniProtKB/TrEMBL;Acc:B9DI04] 0.02 Orthogroups_2024-Update
Bradi2g23110 No alias ribosomal protein S15A 0.07 Orthogroups_2024-Update
Bradi2g54450 No alias ribosomal protein S15A 0.08 Orthogroups_2024-Update
Brara.B01062.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Brara.C01067.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.1 Orthogroups_2024-Update
Brara.F00468.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.1 Orthogroups_2024-Update
Brara.J01354.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Cre05.g234637 No alias Ribosomal protein S8 family protein 0.1 Orthogroups_2024-Update
GRMZM2G083497 No alias ribosomal protein S15A 0.06 Orthogroups_2024-Update
Glyma.01G240000 No alias ribosomal protein S15A 0.09 Orthogroups_2024-Update
Glyma.07G255500 No alias ribosomal protein S15A 0.06 Orthogroups_2024-Update
Glyma.11G003600 No alias ribosomal protein S15A 0.11 Orthogroups_2024-Update
Glyma.11G003700 No alias ribosomal protein S15A 0.11 Orthogroups_2024-Update
Glyma.15G102550 No alias ribosomal protein S15A 0.14 Orthogroups_2024-Update
Glyma.17G018600 No alias ribosomal protein S15A 0.12 Orthogroups_2024-Update
HORVU1Hr1G072060.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
HORVU3Hr1G086930.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
LOC_Os02g27760 No alias 40S ribosomal protein S15a, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g10720 No alias 40S ribosomal protein S15a, putative, expressed 0.04 Orthogroups_2024-Update
MA_10427318g0020 No alias (at3g46040 : 214.0) Regulated by TCP20.; ribosomal... 0.02 Orthogroups_2024-Update
MA_57835g0010 No alias (at3g46040 : 223.0) Regulated by TCP20.; ribosomal... 0.05 Orthogroups_2024-Update
Mp8g06510.1 No alias component RPS15a of SSU proteome 0.02 Orthogroups_2024-Update
Mp8g13010.1 No alias component RPS15a of SSU proteome 0.09 Orthogroups_2024-Update
PSME_00015526-RA No alias (at5g59850 : 244.0) Ribosomal protein S8 family protein;... 0.05 Orthogroups_2024-Update
Potri.001G118100 No alias ribosomal protein S15A 0.09 Orthogroups_2024-Update
Potri.010G208700 No alias Ribosomal protein S8 family protein 0.03 Orthogroups_2024-Update
Pp1s115_101V6 No alias 40s ribosomal protein s15a 0.05 Orthogroups_2024-Update
Pp1s426_18V6 No alias 40s ribosomal protein s15a 0.04 Orthogroups_2024-Update
Seita.2G319400.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Seita.4G092300.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Seita.5G374600.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Sobic.003G012700.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Sobic.007G212600.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Sopen04g025860 No alias Ribosomal protein S8 0.08 Orthogroups_2024-Update
Sopen04g026010 No alias Ribosomal protein S8 0.03 Orthogroups_2024-Update
Sopen04g026020 No alias Ribosomal protein S8 0.11 Orthogroups_2024-Update
evm.model.contig_2045.5 No alias (at5g59850 : 190.0) Ribosomal protein S8 family protein;... 0.13 Orthogroups_2024-Update
evm.model.tig00000158.110 No alias (q9at34|rs15a_dauca : 210.0) 40S ribosomal protein S15a... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009539 photosystem II reaction center IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000630 Ribosomal_S8 7 130
No external refs found!