1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s1_442V6

Pp1s1_442V6


No description available


Gene families : OG_42_0002497 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002497_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s1_442V6
Cluster HCCA clusters: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
MA_791664g0010 No alias (at3g56030 : 120.0) Tetratricopeptide repeat (TPR)-like... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006012 galactose metabolic process IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 329 346
IPR002885 Pentatricopeptide_repeat 198 253
IPR002885 Pentatricopeptide_repeat 279 326
No external refs found!