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  5. Pp1s1_835V6

Pp1s1_835V6


Description : cdpk-related protein kinase


Gene families : OG_42_0000729 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000729_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Physcomitrella release: Pp1s1_835V6
Cluster HCCA clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
73433 No alias CDPK-related kinase 0.04 Orthogroups_2024-Update
Bradi1g61637 No alias CDPK-related kinase 1 0.01 Orthogroups_2024-Update
GRMZM2G422576 No alias CDPK-related kinase 1 0.01 Orthogroups_2024-Update
Glyma.07G051600 No alias CDPK-related kinase 3 0.04 Orthogroups_2024-Update
Potri.005G135900 No alias CDPK-related kinase 0.02 Orthogroups_2024-Update
Sobic.002G377300.1 No alias CRK protein kinase & EC_2.7 transferase transferring... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 139 401
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