Description : ap2 erf domain-containing transcription factor
Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Physcomitrella release: Pp1s204_42V6 | |
Cluster | HCCA clusters: Cluster_239 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi3g08790 | No alias | Integrase-type DNA-binding superfamily protein | 0.01 | Orthogroups_2024-Update | |
Brara.G02798.1 | No alias | transcription factor *(CRF) & subgroup ERF-VI... | 0.02 | Orthogroups_2024-Update | |
Glyma.05G228100 | No alias | Integrase-type DNA-binding superfamily protein | 0.03 | Orthogroups_2024-Update | |
PSME_00005183-RA | No alias | (at5g47220 : 92.8) Encodes a member of the ERF (ethylene... | 0.02 | Orthogroups_2024-Update | |
PSME_00009547-RA | No alias | (at4g17500 : 103.0) Encodes a member of the ERF... | 0.02 | Orthogroups_2024-Update | |
PSME_00041851-RA | No alias | (at1g21910 : 102.0) encodes a member of the DREB... | 0.02 | Orthogroups_2024-Update | |
Potri.017G055400 | No alias | Integrase-type DNA-binding superfamily protein | 0.02 | Orthogroups_2024-Update | |
Pp1s149_253V6 | No alias | ap2 erf domain-containing transcription factor | 0.02 | Orthogroups_2024-Update | |
Sobic.003G028000.1 | No alias | subgroup ERF-III transcription factor | 0.02 | Orthogroups_2024-Update | |
Sobic.009G141500.1 | No alias | subgroup ERF-II transcription factor *(ERF19/20) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
MF | GO:0030515 | snoRNA binding | IEP | Predicted GO |
BP | GO:0032259 | methylation | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001471 | AP2/ERF_dom | 269 | 317 |
No external refs found! |