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  5. Pp1s20_346V6

Pp1s20_346V6


Description : 4-coumarate: ligase


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s20_346V6
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
171251 No alias 4-coumarate:CoA ligase 2 0.02 Orthogroups_2024-Update
177393 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
232017 No alias 4-coumarate:CoA ligase 3 0.02 Orthogroups_2024-Update
A4A49_10638 No alias 4-coumarate--coa ligase 2 0.03 Orthogroups_2024-Update
A4A49_31911 No alias 4-coumarate--coa ligase-like 6 0.03 Orthogroups_2024-Update
A4A49_40482 No alias 4-coumarate--coa ligase 1 0.04 Orthogroups_2024-Update
A4A49_41306 No alias 4-coumarate--coa ligase 2 0.04 Orthogroups_2024-Update
At1g62940 No alias 4-coumarate--CoA ligase-like 1... 0.02 Orthogroups_2024-Update
At3g21240 No alias Cinnamyl alcohol dehydrogenase... 0.03 Orthogroups_2024-Update
At4g05160 No alias 4-coumarate--CoA ligase-like 7... 0.03 Orthogroups_2024-Update
At5g63380 No alias 4-coumarate--CoA ligase-like 9... 0.02 Orthogroups_2024-Update
Bradi3g05750 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
Bradi3g52350 No alias 4-coumarate:CoA ligase 3 0.06 Orthogroups_2024-Update
Bradi4g19947 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Bradi5g04760 No alias acyl-CoA synthetase 5 0.04 Orthogroups_2024-Update
Brara.B03845.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E02091.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Brara.F01459.1 No alias OPC-8 0.02 Orthogroups_2024-Update
Brara.G01098.1 No alias OPC-8 0.02 Orthogroups_2024-Update
Brara.G01099.1 No alias OPC-8 0.02 Orthogroups_2024-Update
Brara.H02326.1 No alias OPC-8 0.05 Orthogroups_2024-Update
Brara.H02328.1 No alias OPC-8 0.03 Orthogroups_2024-Update
Glyma.01G010000 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Glyma.11G091600 No alias 4-coumarate:CoA ligase 3 0.02 Orthogroups_2024-Update
Glyma.13G372000 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
HORVU0Hr1G018190.6 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G030390.2 No alias p-coumarate 0.03 Orthogroups_2024-Update
LOC_Os03g04000 No alias AMP-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g05780 No alias 4-coumarate--CoA ligase-like 7, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os08g14760 No alias AMP-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_103893g0010 No alias (at1g20510 : 417.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
MA_10432138g0010 No alias (at1g20510 : 477.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
MA_109119g0010 No alias (p31687|4cl2_soybn : 667.0) 4-coumarate--CoA ligase 2... 0.08 Orthogroups_2024-Update
MA_4881g0010 No alias (at1g20510 : 253.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.06 Orthogroups_2024-Update
MA_70509g0010 No alias (o24146|4cl2_tobac : 763.0) 4-coumarate--CoA ligase 2... 0.02 Orthogroups_2024-Update
PSME_00006219-RA No alias (at4g05160 : 449.0) Encodes a peroxisomal protein... 0.02 Orthogroups_2024-Update
PSME_00010613-RA No alias (at1g20510 : 572.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
PSME_00013809-RA No alias (at1g20510 : 678.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.04 Orthogroups_2024-Update
PSME_00015568-RA No alias (o24146|4cl2_tobac : 707.0) 4-coumarate--CoA ligase 2... 0.03 Orthogroups_2024-Update
PSME_00015569-RA No alias (o24146|4cl2_tobac : 689.0) 4-coumarate--CoA ligase 2... 0.02 Orthogroups_2024-Update
PSME_00022177-RA No alias (o24146|4cl2_tobac : 717.0) 4-coumarate--CoA ligase 2... 0.04 Orthogroups_2024-Update
PSME_00022572-RA No alias (at1g20510 : 236.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
PSME_00032156-RA No alias (at1g20510 : 519.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
Potri.004G102000 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Seita.1G065800.1 No alias p-coumarate 0.04 Orthogroups_2024-Update
Seita.4G191500.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Seita.6G167900.1 No alias p-coumarate 0.02 Orthogroups_2024-Update
Seita.9G184000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G272700.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Sobic.010G214900.1 No alias p-coumarate 0.02 Orthogroups_2024-Update
Solyc03g097030 No alias 4-coumarate--CoA ligase 0.02 Orthogroups_2024-Update
Solyc03g111170 No alias 4-coumarate:CoA ligase-like protein (AHRD V3.3 *** G7J515_MEDTR) 0.05 Orthogroups_2024-Update
Solyc06g068650 No alias 4-coumarate--CoA ligase 0.04 Orthogroups_2024-Update
Solyc11g069050 No alias 4-coumarate:CoA ligase-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen03g036780 No alias AMP-binding enzyme 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 170 575
IPR025110 AMP-bd_C 584 659
No external refs found!