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  5. Pp1s20_72V6

Pp1s20_72V6


Description : rare cold inducible protein


Gene families : OG_42_0000502 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000502_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s20_72V6
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
At3g05880 No alias RCI2A [Source:UniProtKB/TrEMBL;Acc:A0A178V7D5] 0.02 Orthogroups_2024-Update
At4g30650 No alias UPF0057 membrane protein At4g30650... 0.02 Orthogroups_2024-Update
Kfl00263_0140 kfl00263_0140_v1.1 (q8h5t6|lti6a_orysa : 91.7) Hydrophobic protein LTI6A... 0.04 Orthogroups_2024-Update
LOC_Os03g17790 No alias OsRCI2-5 - Putative low temperature and salt responsive... 0.02 Orthogroups_2024-Update
LOC_Os05g03130 No alias OsRCI2-7 - Putative low temperature and salt responsive... 0.03 Orthogroups_2024-Update
Seita.4G194900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen01g044730 No alias Proteolipid membrane potential modulator 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006879 cellular iron ion homeostasis IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055072 iron ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR000612 PMP3 6 52
No external refs found!