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  5. Pp1s214_65V6

Pp1s214_65V6


Description : root phototropism


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s214_65V6
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
141980 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Brara.H01888.1 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 Orthogroups_2024-Update
GRMZM2G114055 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.03G080600 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.05G105000 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Glyma.05G178500 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.08G135600 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G073650.1 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 Orthogroups_2024-Update
LOC_Os03g10880 No alias BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain... 0.02 Orthogroups_2024-Update
LOC_Os08g03650 No alias BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.01 Orthogroups_2024-Update
Potri.007G093000 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Pp1s96_180V6 No alias phototropic-responsive nph3 family protein 0.02 Orthogroups_2024-Update
Solyc02g064720 No alias phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004371 glycerone kinase activity IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006071 glycerol metabolic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0019400 alditol metabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 76 162
IPR027356 NPH3_dom 259 566
No external refs found!