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  5. Pp1s215_36V6

Pp1s215_36V6


Description : pectin methylesterase


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s215_36V6
Cluster HCCA clusters: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
At2g21610 No alias Pectinesterase 11 [Source:UniProtKB/TrEMBL;Acc:A0A1P8AZ45] 0.02 Orthogroups_2024-Update
At3g17060 No alias Probable pectinesterase 67... 0.02 Orthogroups_2024-Update
Brara.B00244.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.F03540.1 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Glyma.11G032700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G014400 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G025500 No alias pectin methylesterase 31 0.03 Orthogroups_2024-Update
Glyma.19G145700 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G032220.4 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
LOC_Os01g19440 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
MA_6149868g0010 No alias (at2g36710 : 275.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
MA_62865g0010 No alias (at2g36710 : 276.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
MA_99816g0010 No alias (at2g36710 : 325.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
Mp5g03920.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Mp5g03930.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
PSME_00046573-RA No alias (at5g19730 : 519.0) Pectin lyase-like superfamily... 0.05 Orthogroups_2024-Update
Potri.004G128900 No alias pectin methylesterase 31 0.02 Orthogroups_2024-Update
Potri.006G186000 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s112_175V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Pp1s129_155V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s236_72V6 No alias pectin methylesterase 0.05 Orthogroups_2024-Update
Pp1s23_141V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s35_24V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Pp1s3_508V6 No alias pectinesterase ppe8b 0.04 Orthogroups_2024-Update
Pp1s461_15V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s67_6V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Solyc01g079180 No alias Pectinesterase (AHRD V3.3 *** K4AXG4_SOLLC) 0.02 Orthogroups_2024-Update
Solyc07g065360 No alias Pectinesterase (AHRD V3.3 *** K4CHL4_SOLLC) 0.03 Orthogroups_2024-Update
Solyc10g083810 No alias No description available 0.03 Orthogroups_2024-Update
Sopen02g029180 No alias Pectinesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006571 tyrosine biosynthetic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 82 369
No external refs found!