Pp1s219_66V6

No description available

Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s219_66V6
Cluster	HCCA clusters: Cluster_271

Target	Alias	Description	ECC score	Gene Family Method
444400	No alias	plastid transcriptionally active 15	0.02	Orthogroups_2024-Update
At1g62010	No alias	F8K4.20 protein [Source:UniProtKB/TrEMBL;Acc:O80705]	0.05	Orthogroups_2024-Update
At1g62490	No alias	Mitochondrial transcription termination factor family...	0.02	Orthogroups_2024-Update
At5g64950	No alias	Emb [Source:UniProtKB/TrEMBL;Acc:Q9LV83]	0.03	Orthogroups_2024-Update
Bradi1g16160	No alias	Mitochondrial transcription termination factor family protein	0.03	Orthogroups_2024-Update
Bradi3g00830	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Brara.A02580.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E03356.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.07G249900	No alias	Mitochondrial transcription termination factor family protein	0.03	Orthogroups_2024-Update
Glyma.08G107000	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Glyma.08G306100	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Glyma.09G046000	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Glyma.13G216701	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Glyma.15G153150	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
HORVU2Hr1G024310.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
HORVU2Hr1G116050.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
HORVU5Hr1G056910.1	No alias	mTERF-type transcription factor	0.02	Orthogroups_2024-Update
HORVU6Hr1G003560.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
HORVU6Hr1G003570.23	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
HORVU6Hr1G005710.1	No alias	mTERF-type transcription factor	0.02	Orthogroups_2024-Update
HORVU6Hr1G075340.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
HORVU7Hr1G081400.3	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os07g24090	No alias	mTERF domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g09990	No alias	mTERF family protein, expressed	0.04	Orthogroups_2024-Update
LOC_Os11g10000	No alias	mTERF family protein, expressed	0.02	Orthogroups_2024-Update
MA_10426325g0010	No alias	(at1g79220 : 122.0) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
MA_205355g0010	No alias	(at5g64950 : 101.0) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
MA_26585g0010	No alias	(at5g64950 : 83.2) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
MA_593288g0010	No alias	(at1g79220 : 104.0) Mitochondrial transcription...	0.02	Orthogroups_2024-Update
MA_804585g0010	No alias	(at5g64950 : 91.3) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
PSME_00017715-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00020293-RA	No alias	(at5g23930 : 110.0) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
PSME_00030142-RA	No alias	(at5g64950 : 89.4) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
PSME_00032600-RA	No alias	(at5g64950 : 90.5) Mitochondrial transcription...	0.02	Orthogroups_2024-Update
PSME_00056135-RA	No alias	(at1g79220 : 100.0) Mitochondrial transcription...	0.02	Orthogroups_2024-Update
PSME_00056194-RA	No alias	(at5g64950 : 106.0) Mitochondrial transcription...	0.04	Orthogroups_2024-Update
PSME_00056620-RA	No alias	(at1g79220 : 139.0) Mitochondrial transcription...	0.04	Orthogroups_2024-Update
Potri.015G038400	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Seita.3G247400.1	No alias	mTERF-type transcription factor	0.02	Orthogroups_2024-Update
Seita.4G092000.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
Seita.4G094400.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
Seita.4G095000.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
Seita.4G095600.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
Seita.6G130600.1	No alias	mTERF-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G179800.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.004G305100.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
Solyc04g011700	No alias	Mitochondrial transcription termination factor family...	0.02	Orthogroups_2024-Update
Sopen04g028720	No alias	mTERF	0.02	Orthogroups_2024-Update
evm.model.tig00001416.3	No alias	no hits & (original description: no original description)	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	Predicted GO
MF	GO:0004635	phosphoribosyl-AMP cyclohydrolase activity	IEP	Predicted GO
BP	GO:0006547	histidine metabolic process	IEP	Predicted GO
MF	GO:0008963	phospho-N-acetylmuramoyl-pentapeptide-transferase activity	IEP	Predicted GO
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Predicted GO
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Predicted GO
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Predicted GO
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Predicted GO
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Predicted GO
MF	GO:0019238	cyclohydrolase activity	IEP	Predicted GO
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Predicted GO
BP	GO:0043461	proton-transporting ATP synthase complex assembly	IEP	Predicted GO
BP	GO:0052803	imidazole-containing compound metabolic process	IEP	Predicted GO
BP	GO:0070071	proton-transporting two-sector ATPase complex assembly	IEP	Predicted GO
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003690	MTERF	156	340
IPR003690	MTERF	337	645

External Links

No external refs found!

Pp1s219_66V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation