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  5. Pp1s21_218V6

Pp1s21_218V6


Description : arginine serine-rich-splicing


Gene families : OG_42_0001263 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s21_218V6
Cluster HCCA clusters: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Mp3g15540.1 No alias Serine/arginine-rich splicing factor SR45a... 0.02 Orthogroups_2024-Update
PSME_00019800-RA No alias (at4g35785 : 132.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0004055 argininosuccinate synthase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 56 125
No external refs found!