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  5. Solyc11g040340

Solyc11g040340


Description : LEE14BDGL L.esculentum endo-1,4-beta-D-glucanase


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g040340
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
117027 No alias glycosyl hydrolase 9B13 0.03 Orthogroups_2024-Update
A4A49_19880 No alias endoglucanase 8 0.03 Orthogroups_2024-Update
AC203408.4_FG003 No alias glycosyl hydrolase 9B10 0.02 Orthogroups_2024-Update
At1g22880 No alias Endoglucanase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q2V4L8] 0.03 Orthogroups_2024-Update
At4g11050 No alias Endoglucanase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7I0] 0.03 Orthogroups_2024-Update
At4g39000 No alias Endoglucanase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY58] 0.02 Orthogroups_2024-Update
Bradi1g54580 No alias cellulase 2 0.03 Orthogroups_2024-Update
Bradi3g57190 No alias glycosyl hydrolase 9A4 0.02 Orthogroups_2024-Update
Bradi5g26010 No alias glycosyl hydrolase 9C1 0.02 Orthogroups_2024-Update
Brara.G03044.1 No alias class-B endo-1,4-beta-glucanase 0.03 Orthogroups_2024-Update
Brara.I01325.1 No alias class-C endo-1,4-beta-glucanase 0.02 Orthogroups_2024-Update
Brara.I03254.1 No alias class-B endo-1,4-beta-glucanase 0.02 Orthogroups_2024-Update
Brara.I05558.1 No alias class-B endo-1,4-beta-glucanase 0.02 Orthogroups_2024-Update
Glyma.06G056900 No alias glycosyl hydrolase 9A4 0.03 Orthogroups_2024-Update
Glyma.09G231800 No alias glycosyl hydrolase 9B1 0.02 Orthogroups_2024-Update
Glyma.14G019900 No alias glycosyl hydrolase 9B8 0.06 Orthogroups_2024-Update
HORVU5Hr1G081200.5 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os04g57860 No alias endoglucanase precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_128094g0010 No alias (at1g02800 : 545.0) Encodes a protein with similarity to... 0.02 Orthogroups_2024-Update
PSME_00001650-RA No alias (at4g11050 : 540.0) glycosyl hydrolase 9C3 (GH9C3);... 0.02 Orthogroups_2024-Update
PSME_00006676-RA No alias (at4g02290 : 363.0) glycosyl hydrolase 9B13 (GH9B13);... 0.04 Orthogroups_2024-Update
PSME_00007066-RA No alias (at1g02800 : 663.0) Encodes a protein with similarity to... 0.04 Orthogroups_2024-Update
PSME_00027441-RA No alias (at4g11050 : 477.0) glycosyl hydrolase 9C3 (GH9C3);... 0.02 Orthogroups_2024-Update
Potri.001G092200 No alias glycosyl hydrolase 9C2 0.02 Orthogroups_2024-Update
Potri.005G237700 No alias glycosyl hydrolase 9B5 0.02 Orthogroups_2024-Update
Potri.014G126900 No alias glycosyl hydrolase 9B13 0.02 Orthogroups_2024-Update
Pp1s100_137V6 No alias endo- -beta- 0.02 Orthogroups_2024-Update
Pp1s100_139V6 No alias endo-beta- -glucanase 0.03 Orthogroups_2024-Update
Seita.3G050200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.3G076100.1 No alias class-C endo-1,4-beta-glucanase 0.02 Orthogroups_2024-Update
Seita.5G019600.1 No alias class-C endo-1,4-beta-glucanase 0.02 Orthogroups_2024-Update
Sobic.003G148500.1 No alias class-B endo-1,4-beta-glucanase 0.03 Orthogroups_2024-Update
Sobic.004G021400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen07g024630 No alias Glycosyl hydrolase family 9 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predicted GO
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 20 486
No external refs found!