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  5. Solyc11g042420

Solyc11g042420


Description : Cytochrome c (AHRD V3.3 *** CYC_SOLTU)


Gene families : OG_42_0002110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g042420
Cluster HCCA clusters: Cluster_298

Target Alias Description ECC score Gene Family Method Actions
Mp2g15050.1 No alias cytochrome c protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR009056 Cyt_c-like_dom 13 110
No external refs found!